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We present SciRIFF (Scientific Resource for Instruction-Following and Finetuning), a dataset of 137K instruction-following instances for training and evaluation, covering 54 tasks. These tasks span five core scientific literature…

We present the open-source computer program JETSPIN, specifically designed to simulate the electrospinning process of nanofibers. Its capabilities are shown with proper reference to the underlying model, as well as a description of the…

Computational Physics · Physics 2015-08-28 Marco Lauricella , Giuseppe Pontrelli , Ivan Coluzza , Dario Pisignano , Sauro Succi

Language barriers in scientific documents hinder the diffusion and development of science and technologies. However, prior efforts in translating such documents largely overlooked the information in layouts. To bridge the gap, we introduce…

Computation and Language · Computer Science 2025-09-23 Rongxin Ouyang , Chang Chu , Zhikuang Xin , Xiangyao Ma

Scientific workflows automate the analysis of large-scale scientific data, fostering the reuse of data processing operators as well as the reproducibility and traceability of analysis results. In exploratory research, however, workflows are…

Other Computer Science · Computer Science 2023-09-26 Sebastian Pohl , Nourhan Elfaramawy , Kedi Cao , Birte Kehr , Matthias Weidlich

scida is a Python package for reading and analyzing large scientific data sets with support for various cosmological and galaxy formation simulations out-of-the-box. Data access is provided through a hierarchical dictionary-like data…

Instrumentation and Methods for Astrophysics · Physics 2024-02-29 Chris Byrohl , Dylan Nelson

In this paper, we introduce TextBrewer, an open-source knowledge distillation toolkit designed for natural language processing. It works with different neural network models and supports various kinds of supervised learning tasks, such as…

Computation and Language · Computer Science 2020-12-14 Ziqing Yang , Yiming Cui , Zhipeng Chen , Wanxiang Che , Ting Liu , Shijin Wang , Guoping Hu

JETSPIN is an open-source computer program specifically designed to simulate the electrospinning process of nanofibers. This manual provides an overview of JETSPIN, focusing primarily on its structure, parallel implementations,…

Soft Condensed Matter · Physics 2015-07-28 Marco Lauricella , Giuseppe Pontrelli , Ivan Coluzza , Dario Pisignano , Sauro Succi

Scikit-HEP is a community-driven and community-oriented project with the goal of providing an ecosystem for particle physics data analysis in Python. Scikit-HEP is a toolset of approximately twenty packages and a few "affiliated" packages.…

We introduce CSLib, an open-source framework for proving computer-science-related theorems and writing formally verified code in the Lean proof assistant. CSLib aims to be for computer science what Lean's Mathlib is for mathematics. Mathlib…

Polyploidization is an important evolutionary process which affects organisms ranging from plants to fish and fungi. The signal left behind by it is in the form of a species' ploidy level (number of complete chromosome sets found in a cell)…

Populations and Evolution · Quantitative Biology 2022-11-10 Liam J. Maher , Taoyang Wu , Katharina T. Huber

Inference on time series data is a common requirement in many scientific disciplines and internet of things (IoT) applications, yet there are few resources available to domain scientists to easily, robustly, and repeatably build such…

Mathematical Software · Computer Science 2016-09-16 Brett Naul , Stéfan van der Walt , Arien Crellin-Quick , Joshua S. Bloom , Fernando Pérez

Emerging tools bring forth fresh approaches to work, and the field of natural science is no different. In natural science, traditional manual, serial, and labour-intensive work is being augmented by automated, parallel, and iterative…

Computation and Language · Computer Science 2023-08-29 Tong Xie , Yuwei Wan , Wei Huang , Zhenyu Yin , Yixuan Liu , Shaozhou Wang , Qingyuan Linghu , Chunyu Kit , Clara Grazian , Wenjie Zhang , Imran Razzak , Bram Hoex

Computational reproducibility of scientific results, that is, the execution of a computational experiment (e.g., a script) using its original settings (data, code, etc.), should always be possible. However, reproducibility has become a…

Human-Computer Interaction · Computer Science 2025-04-15 Lázaro Costa , Susana Barbosa , Jácome Cunha

We describe an open-source toolkit for neural machine translation (NMT). The toolkit prioritizes efficiency, modularity, and extensibility with the goal of supporting NMT research into model architectures, feature representations, and…

Computation and Language · Computer Science 2017-03-07 Guillaume Klein , Yoon Kim , Yuntian Deng , Jean Senellart , Alexander M. Rush

Recently, we see a new type of interfaces for programmers based on web technology. For example, JSFiddle, IPython Notebook and R-studio. Web technology enables cloud-based solutions, embedding in tutorial web pages, atractive rendering of…

Programming Languages · Computer Science 2016-08-06 Jan Wielemaker , Torbjörn Lager , Fabrizio Riguzzi

With the growing availability of data within various scientific domains, generative models hold enormous potential to accelerate scientific discovery. They harness powerful representations learned from datasets to speed up the formulation…

We introduce an open-source toolkit for neural machine translation (NMT) to support research into model architectures, feature representations, and source modalities, while maintaining competitive performance, modularity and reasonable…

Computation and Language · Computer Science 2017-09-13 Guillaume Klein , Yoon Kim , Yuntian Deng , Josep Crego , Jean Senellart , Alexander M. Rush

www.processmining-software.com is a dedicated website for process mining software comparison and was developed to give practitioners and researchers an overview of commercial tools available on the market. Based on literature review and…

Software Engineering · Computer Science 2021-02-05 Daniel Viner , Matthias Stierle , Martin Matzner

Cloud data warehouses (CDWs) bring large-scale data and compute power closer to users in enterprises. However, existing tools for analyzing data in CDWs are either limited in ad-hoc transformations or difficult to use for business users.…

Databases · Computer Science 2022-08-19 James Gale , Max Seiden , Deepanshu Utkarsh , Jason Frantz , Rob Woollen , Çağatay Demiralp

In the past decade, many scientific news media that report scientific breakthroughs and discoveries emerged, bringing science and technology closer to the general public. However, not all scientific news article cites proper sources, such…

Information Retrieval · Computer Science 2022-05-03 Md Reshad Ul Hoque , Jiang Li , Jian Wu