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Modern computational neuroscience strives to develop complex network models to explain dynamics and function of brains in health and disease. This process goes hand in hand with advancements in the theory of neuronal networks and increasing…

We propose a simulation-based approach for performance modeling of parallel applications on high-performance computing platforms. Our approach enables full-system performance modeling: (1) the hardware platform is represented by an abstract…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-06 Gen Xu , Huda Ibeid , Xin Jiang , Vjekoslav Svilan , Zhaojuan Bian

Workload characterization is an integral part of performance analysis of high performance computing (HPC) systems. An understanding of workload properties sheds light on resource utilization and can be used to inform performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-01-16 Nikolay A. Simakov , Joseph P. White , Robert L. DeLeon , Steven M. Gallo , Matthew D. Jones , Jeffrey T. Palmer , Benjamin Plessinger , Thomas R. Furlani

Hierarchical Text Classification (HTC) is a natural language processing task with the objective to classify text documents into a set of classes from a structured class hierarchy. Many HTC approaches have been proposed which attempt to…

Information Retrieval · Computer Science 2024-12-02 Jaco du Toit , Herman Redelinghuys , Marcel Dunaiski

This draft report summarizes and details the findings, results, and recommendations derived from the ASCR/HEP Exascale Requirements Review meeting held in June, 2015. The main conclusions are as follows. 1) Larger, more capable computing…

Scientific applications are starting to explore the viability of quantum computing. This exploration typically begins with quantum simulations that can run on existing classical platforms, albeit without the performance advantages of real…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-16 Amir Shehata , Thomas Naughton , In-Saeng Suh

Interest in many-core architectures applied to real time selections is growing in High Energy Physics (HEP) experiments. In this paper we describe performance measurements of many-core devices when applied to a typical HEP online task: the…

Instrumentation and Detectors · Physics 2014-11-25 A. Gianelle , S. Amerio , D. Bastieri , M. Corvo , W. Ketchum , T. Liu , A. Lonardo , D. Lucchesi , S. Poprocki , R. Rivera , L. Tosoratto , P. Vicini , P. Wittich

In this work we introduce an open source suite of quantum application-oriented performance benchmarks that is designed to measure the effectiveness of quantum computing hardware at executing quantum applications. These benchmarks probe a…

High-Level Synthesis (HLS) is emerging as a mainstream design methodology, allowing software designers to enjoy the benefits of a hardware implementation. Significant work has led to effective compilers that produce high-quality hardware…

Software Engineering · Computer Science 2015-08-28 Jeffrey Goeders , Steven J. E. Wilton

High-Performance Computing (HPC) platforms enable scientific software to achieve breakthroughs in many research fields such as physics, biology, and chemistry, by employing Research Software Engineering (RSE) techniques. These include 1)…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-10-16 Matan Rusanovsky , Re'em Harel , Lee-or Alon , Idan Mosseri , Harel Levin , Gal Oren

Benchmarking, which involves collecting reference datasets and demonstrating method performances, is a requirement for the development of new computational tools, but also becomes a domain of its own to achieve neutral comparisons of…

Other Quantitative Biology · Quantitative Biology 2025-07-24 Izaskun Mallona , Charlotte Soneson , Ben Carrillo , Almut Luetge , Daniel Incicau , Reto Gerber , Anthony Sonrel , Mark D. Robinson

The Offline Software of the CMS Experiment at the Large Hadron Collider (LHC) at CERN consists of 6M lines of in-house code, developed over a decade by nearly 1000 physicists, as well as a comparable amount of general use open-source code.…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-01-20 David Abdurachmanov , Alessandro Degano , Peter Elmer , Giulio Eulisse , David Mendez , Shahzad Muzaffar

The increasing versatility of language models (LMs) has given rise to a new class of benchmarks that comprehensively assess a broad range of capabilities. Such benchmarks are associated with massive computational costs, extending to…

Computation and Language · Computer Science 2024-04-02 Yotam Perlitz , Elron Bandel , Ariel Gera , Ofir Arviv , Liat Ein-Dor , Eyal Shnarch , Noam Slonim , Michal Shmueli-Scheuer , Leshem Choshen

RECIPE (REliable power and time-ConstraInts-aware Predictive management of heterogeneous Exascale systems) is a recently started project funded within the H2020 FETHPC programme, which is expressly targeted at exploring new High-Performance…

In this report we investigate the performance of Hadoop clusters, deployed with separated storage and compute layers, on top of a hypervisor managing a single physical host. We have analyzed and evaluated the different Hadoop cluster…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-11-17 Todor Ivanov , Roberto V. Zicari , Sead Izberovic , Karsten Tolle

European efforts to boost competitiveness in the sector of space services promote the research and development of advanced software and hardware solutions. The EU-funded HERMES project contributes to the effort by qualifying…

This report evaluates the new analytical capabilities of DataStax Enterprise (DSE) [1] through the use of standard Hadoop workloads. In particular, we run experiments with CPU and I/O bound micro-benchmarks as well as OLAP-style analytical…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-12-17 Todor Ivanov , Raik Niemann , Sead Izberovic , Marten Rosselli , Karsten Tolle , Roberto V. Zicari

The road map to the FCC Feasibility Study Report, for submission to the next Update of the European Strategy for Particle Physics, will require detailed simulation and advanced reconstruction algorithms to explore and maximise the physics…

High Energy Physics - Experiment · Physics 2021-11-19 Gerardo Ganis , Clément Helsens , Valentin Völkl

Performance analysis is an essential task in High-Performance Computing (HPC) systems and it is applied for different purposes such as anomaly detection, optimal resource allocation, and budget planning. HPC monitoring tasks generate a huge…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-12-12 Mohamed S. Halawa , Rebeca P. Díaz-Redondo , Ana Fernández-Vilas

The increasing use and cost of high performance computing (HPC) requires new easy-to-use tools to enable HPC users and HPC systems engineers to transparently understand the utilization of resources. The MIT Lincoln Laboratory Supercomputing…

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