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Deep neural networks have demonstrated impressive performance in various machine learning tasks. However, they are notoriously sensitive to changes in data distribution. Often, even a slight change in the distribution can lead to drastic…
It is increasingly common clinically for cancer specimens to be examined using techniques that identify somatic mutations. In principle these mutational profiles can be used to diagnose the tissue of origin, a critical task for the 3-5% of…
We apply deep learning for retrieval of the time-dependent bond length in the dissociating two-dimensional H$_2^{+}$ molecule using photoelectron momentum distributions. We consider a pump-probe scheme and calculate electron momentum…
Deep learning has arguably achieved tremendous success in recent years. In simple words, deep learning uses the composition of many nonlinear functions to model the complex dependency between input features and labels. While neural networks…
Data-driven deep learning approaches to image registration can be less accurate than conventional iterative approaches, especially when training data is limited. To address this whilst retaining the fast inference speed of deep learning, we…
Universal Domain Adaptation (UNDA) aims to handle both domain-shift and category-shift between two datasets, where the main challenge is to transfer knowledge while rejecting unknown classes which are absent in the labeled source data but…
Deep Neural Networks (DNNs) are prone to overfitting and hence have high variance. Overfitted networks do not perform well for a new data instance. So instead of using a single DNN as classifier we propose an ensemble of seven independent…
Deep neural networks have shown great achievements in solving complex problems. However, there are fundamental problems that limit their real world applications. Lack of measurable criteria for estimating uncertainty in the network outputs…
In this work, we build a generic architecture of Convolutional Neural Networks to discover empirical properties of neural networks. Our first contribution is to introduce a state-of-the-art framework that depends upon few hyper parameters…
Recent advances in genomic sequencing technology have resulted in an abundance of genome sequence data. Despite the progress in interpreting those data, there remains a broad scope for their translation into clinical and societal benefits.…
Deep neural networks have achieved remarkable success in computer vision tasks. Existing neural networks mainly operate in the spatial domain with fixed input sizes. For practical applications, images are usually large and have to be…
Genotype networks are a method used in systems biology to study the "innovability" of a set of genotypes having the same phenotype. In the past they have been applied to determine the genetic heterogeneity, and stability to mutations, of…
Accurate sleep stage classification across datasets remains challenging due to variability in EEG channel montages, sampling rates, recording environments, and subject populations. Although deep learning has shown considerable promise for…
Quantum machine learning is an important application of quantum computing in the era of noisy intermediate-scale quantum devices. Domain adaptation is an effective method for addressing the distribution discrepancy problem between the…
We consider the task of detecting regulatory elements in the human genome directly from raw DNA. Past work has focused on small snippets of DNA, making it difficult to model long-distance dependencies that arise from DNA's 3-dimensional…
Given the ubiquity of deep neural networks, it is important that these models do not reveal information about sensitive data that they have been trained on. In model inversion attacks, a malicious user attempts to recover the private…
This paper proposes a framework for modeling sound change that combines deep learning and iterative learning. Acquisition and transmission of speech is modeled by training generations of Generative Adversarial Networks (GANs) on unannotated…
Neural networks are known to be data hungry and domain sensitive, but it is nearly impossible to obtain large quantities of labeled data for every domain we are interested in. This necessitates the use of domain adaptation strategies. One…
Motivation :Reconstructing the topology of a gene regulatory network is one of the key tasks in systems biology. Despite of the wide variety of proposed methods, very little work has been dedicated to the assessment of their stability…
Deep Learning (DL) , a variant of the neural network algorithms originally proposed in the 1980s, has made surprising progress in Artificial Intelligence (AI), ranging from language translation, protein folding, autonomous cars, and more…