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The hydrodynamic interactions of a suspension of self-propelled particles are studied using a direct numerical simulation method which simultaneously solves for the host fluid and the swimming particles. A modified version of the "Smoothed…

Soft Condensed Matter · Physics 2013-01-15 John J. Molina , Yasuya Nakayama , Ryoichi Yamamoto

Microscopic self-propelled swimmers capable of autonomous navigation through complex environments provide appealing opportunities for localization, pick-up and delivery of micro-and nanoscopic objects. Inspired by motile cells and bacteria,…

Soft Condensed Matter · Physics 2012-05-07 W. Yang , V. R. Misko , K. Nelissen , M. Kong , F. M. Peeters

Populations of swimming microorganisms produce fluid motions that lead to dramatically enhanced diffusion of tracer particles. Using simulations of suspensions of swimming particles in a periodic domain, we capture this effect and show that…

Soft Condensed Matter · Physics 2008-07-22 Patrick T. Underhill , Juan P. Hernández-Ortiz , Michael D. Graham

We investigate a model for the dynamics of ellipsoidal microswimmers in an externally imposed, laminar Kolmogorov flow. Through a phase-space analysis of the dynamics without noise, we find that swimmers favor either cross-stream or…

Soft Condensed Matter · Physics 2022-02-03 Simon A. Berman , Kyle S. Ferguson , Nathaniel Bizzak , Thomas H. Solomon , Kevin A. Mitchell

We study the diffusion process through an ideal polymer network, using numerical methods. Polymers are modeled by random walks on the bonds of a two-dimensional square lattice. Molecules occupy the lattice cells and may jump to the…

Statistical Mechanics · Physics 2007-05-23 Yong Wu , B Schmittmann , R K P Zia

Microorganisms naturally move in microstructured fluids. Using the simulation method of multi-particle collision dynamics, we study an undulatory Taylor line swimming in a two-dimensional microchannel and in a cubic lattice of obstacles,…

Soft Condensed Matter · Physics 2016-04-11 Jan L. Münch , Davod Alizadehrad , Sujin Babu , Holger Stark

We use the Deep Q-Network with reinforcement learning to investigate the emergence of odd elasticity in an elastic microswimmer model. For an elastic microswimmer, it is challenging to obtain the optimized dynamics due to the intricate…

Soft Condensed Matter · Physics 2024-06-10 Li-Shing Lin , Kento Yasuda , Kenta Ishimoto , Shigeyuki Komura

The problem of optimal microscopic swimming in a noisy environment is analyzed. A simplified model in which propulsion is generated by the relative motion of three spheres connected by immaterial links has been considered. We show that an…

Statistical Mechanics · Physics 2015-06-18 Piero Olla

We have studied by Molecular Dynamics computer simulations the dynamics of water confined in ionic surfactants phases, ranging from well ordered lamellar structures to micelles at low and high water loading, respectively. We have analysed…

Soft Condensed Matter · Physics 2016-03-23 Samuel Hanot , Sandrine Lyonnard , Stefano Mossa

When an ensemble of particles interact hydrodynamically, they generically display large-scale transient structures such as swirls in sedimenting particles [1], or colloidal strings in sheared suspensions [2]. Understanding these…

Soft Condensed Matter · Physics 2013-01-24 Nicolas Desreumaux , Jean-Baptiste Caussin , Raphael Jeanneret , Eric Lauga , Denis Bartolo

With the continuing rapid development of artificial microrobots and active particles, questions of microswimmer guidance and control are becoming ever more relevant and prevalent. In both the applications and theoretical study of such…

Soft Condensed Matter · Physics 2021-06-03 Clément Moreau , Kenta Ishimoto , Eamonn A. Gaffney , Benjamin J. Walker

Diffusion of a tagged particle near a constraining biological surface is examined numerically by modeling the surface-water interaction by an effective potential. The effective potential is assumed to be given by an asymmetric double well…

Soft Condensed Matter · Physics 2007-05-23 Arnab Mukherjee , Biman Bagchi

We study an active matter system comprised of magnetic microswimmers confined in a microfluidic channel and show that it exhibits a new type of self-organized behavior. Combining analytical techniques and Brownian dynamics simulations, we…

Statistical Mechanics · Physics 2021-02-24 Fanlong Meng , Daiki Matsunaga , Benoît Mahault , Ramin Golestanian

We study theoretically the behavior of a class of hydrodynamic dipoles. This study is motivated by recent experiments on synthetic and biological swimmers in microfluidic \textit{Hele-Shaw} type geometries. Under such confinement, a…

Fluid Dynamics · Physics 2015-09-30 Eva Kanso , Alan Tsang

It is known that obstacles can hydrodynamically trap bacteria and synthetic microswimmers in orbits, where the trapping time heavily depends on the swimmer flow field and noise is needed to escape the trap. Here, we use experiments and…

Hydrodynamic interactions driven by particle activity are ubiquitous in active colloidal systems. Although these interactions are strongly influenced by the interfacial actuation mechanism and geometry of the swimming particles, theoretical…

Soft Condensed Matter · Physics 2025-06-17 Anson G. Thambi , William E. Uspal

While previous experimental and numerical studies of dilute micro-swimmer suspensions have focused on the behaviours of swimmers in the bulk flow and near boundaries, models typically do not account for the interplay between bulk flow and…

Fluid Dynamics · Physics 2023-06-27 Smitha Maretvadakethope , Andrew L. Hazel , Bakhti Vasiev , Rachel N. Bearon

We study synchronization of locally coupled noisy phase oscillators which move diffusively in a one-dimensional ring. Together with the disordered and the globally synchronized states, the system also exhibits several wave-like states which…

Biological Physics · Physics 2010-09-22 Fernando Peruani , Ernesto M. Nicola , Luis G. Morelli

Living microorganisms are capable of a tactic response to external stimuli by swimming towards or away from the stimulus source; they do so by adapting their tactic signal transduction pathways to the environment. Their self-motility thus…

Soft Condensed Matter · Physics 2016-10-12 Alexander Geiseler , Peter Hänggi , Fabio Marchesoni , Colm Mulhern , Sergey Savel'ev

Despite their importance in many biological, ecological and physical processes, microorganismal fluid flows under tight confinement have not been investigated experimentally. Strong screening of Stokelets in this geometry suggests that the…

Biological Physics · Physics 2019-12-18 Raphaël Jeanneret , Dmitri O. Pushkin , Marco Polin
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