English
Related papers

Related papers: Derivative structure enumeration using binary deci…

200 papers

This paper describes a new and purely functional implementation technique of binary heaps. A binary heap is a tree-based data structure that implements priority queue operations (insert, remove, minimum/maximum) and guarantees at worst…

Data Structures and Algorithms · Computer Science 2013-12-18 Vladimir Kostyukov

A computable structure $\mathcal{A}$ is decidable if, given a formula $\varphi(\bar{x})$ of elementary first-order logic, and a tuple $\bar{a} \in \mathcal{A}$, we have a decision procedure to decide whether $\varphi$ holds of $\bar{a}$. We…

Logic · Mathematics 2017-02-23 Matthew Harrison-Trainor

We consider dynamical systems arising from substitutions over a finite alphabet. We prove that such a system is linearly repetitive if and only if it is minimal. Based on this characterization we extend various results from primitive…

Dynamical Systems · Mathematics 2015-02-24 D. Damanik , D. Lenz

Finite dynamical systems (FDSs) are commonly used to model systems with a finite number of states that evolve deterministically and at discrete time steps. Considered up to isomorphism, those correspond to functional graphs. As such, FDSs…

Discrete Mathematics · Computer Science 2022-12-15 Émile Naquin , Maximilien Gadouleau

Deep declarative networks and other recent related works have shown how to differentiate the solution map of a (continuous) parametrized optimization problem, opening up the possibility of embedding mathematical optimization problems into…

Machine Learning · Computer Science 2022-02-28 Stephen Gould , Dylan Campbell , Itzik Ben-Shabat , Chamin Hewa Koneputugodage , Zhiwei Xu

The problem of decomposing non-manifold object has already been studied in solid modeling. However, the few proposed solutions are limited to the problem of decomposing solids described through their boundaries. In this thesis we study the…

Graphics · Computer Science 2019-04-03 Franco Morando

Various specifiable combinatorial structures, with d extensive parameters, can be exactly sampled both by the recursive method, with linear arithmetic complexity if a heavy preprocessing is performed, or by the Boltzmann method, with…

Data Structures and Algorithms · Computer Science 2013-07-09 Frederique Bassino , Andrea Sportiello

Directed acyclic graphs are the basic representation of the structure underlying Bayesian networks, which represent multivariate probability distributions. In many practical applications, such as the reverse engineering of gene regulatory…

Computation · Statistics 2013-11-15 Jack Kuipers , Giusi Moffa

Identifying a coupled dynamical system out of many plausible candidates, each of which could serve as the underlying generator of some observed measurements, is a profoundly ill posed problem that commonly arises when modelling real world…

Neurons and Cognition · Quantitative Biology 2019-09-17 Amirhossein Jafarian , Peter Zeidman , Vladimir Litvak , Karl Friston

Linear diagrams are used to visualize set systems by depicting set memberships as horizontal line segments in a matrix, where each set is represented as a row and each element as a column. Each such line segment of a set is shown in a…

Graphics · Computer Science 2023-02-17 Markus Wallinger , Alexander Dobler , Martin Nöllenburg

This paper presents a new approach to distributed controller design that exploits a partial-structure representation of linear time invariant systems to characterize the structure of a system. This partial-structure representation, called…

Optimization and Control · Mathematics 2012-09-18 Anurag Rai , Sean Warnick

Two dimensional matrices with binary (0/1) entries are a common data structure in many research fields. Examples include ecology, economics, mathematics, physics, psychometrics and others. Because the columns and rows of these matrices…

The large-scale search for high-performing candidate 2D materials is limited to calculating a few simple descriptors, usually with first-principles density functional theory calculations. In this work, we alleviate this issue by extending…

Materials Science · Physics 2020-07-07 Victor Venturi , Holden Parks , Zeeshan Ahmad , Venkatasubramanian Viswanathan

Nowadays, deep neural networks (DNNs) have become the main instrument for machine learning tasks within a wide range of domains, including vision, NLP, and speech. Meanwhile, in an important case of heterogenous tabular data, the advantage…

Machine Learning · Computer Science 2019-09-20 Sergei Popov , Stanislav Morozov , Artem Babenko

Binary relations are commonly used in Computer Science for modeling data. In addition to classical representations using matrices or lists, some compressed data structures have recently been proposed to represent binary relations in compact…

Data Structures and Algorithms · Computer Science 2020-02-24 Carlos Quijada-Fuentes , Miguel R. Penabad , Susana Ladra , Gilberto Gutiérrez

A difference matrix over a group is a discrete structure that is intimately related to many other combinatorial designs, including mutually orthogonal Latin squares, orthogonal arrays, and transversal designs. Interest in constructing…

Combinatorics · Mathematics 2020-05-22 Koen van Greevenbroek , Jonathan Jedwab

Diagrammatic sets are presheaves on a rich category of shapes, whose definition is motivated by combinatorial topology and higher-dimensional diagram rewriting. These shapes include representatives of oriented simplices, cubes, and positive…

Algebraic Topology · Mathematics 2024-07-16 Clémence Chanavat , Amar Hadzihasanovic

In this note, we initiate a study of the finite-dimensional representation theory of a class of algebras that correspond to noncommutative deformations of compact surfaces of arbitrary genus. Low dimensional representations are investigated…

Representation Theory · Mathematics 2020-05-20 Joakim Arnlind

We introduce the Deletable Bloom filter (DlBF) as a new spin on the popular data structure based on compactly encoding the information of where collisions happen when inserting elements. The DlBF design enables false-negative-free deletions…

Data Structures and Algorithms · Computer Science 2010-05-04 Christian Esteve Rothenberg , Carlos A. B. Macapuna , Fabio L. Verdi , Mauricio F. Magalhaes

DNA strand displacement systems have proven themselves to be fertile substrates for the design of programmable molecular machinery and circuitry. Domain-level reaction enumerators provide the foundations for molecular programming languages…

Computational Engineering, Finance, and Science · Computer Science 2020-06-05 Casey Grun , Karthik Sarma , Brian Wolfe , Seung Woo Shin , Erik Winfree