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Structured populations are ubiquitous across the biological sciences. Mathematical models of these populations allow us to understand how individual physiological traits drive the overall dynamics in aggregate. For example, linear age- or…

Analysis of PDEs · Mathematics 2022-04-25 Sabina L. Altus , Jeffrey C. Cameron , David M. Bortz

We introduce a broad class of spatial models to describe how spatially heterogeneous populations live, die, and reproduce. Individuals are represented by points of a point measure, whose birth and death rates can depend both on spatial…

Probability · Mathematics 2024-01-02 Alison M. Etheridge , Thomas G. Kurtz , Ian Letter , Peter L. Ralph , Terence Tsui Ho Lung

A simplified method to compute $R_t$, the Effective Reproduction Number, is presented. The method relates the value of $R_t$ to the estimation of the doubling time performed with a local exponential fit. The condition $R_t = 1$ corresponds…

A density-dependent branching process is a particle system in which individuals reproduce independently, but in a way that depends on the current population size. This feature can model a wide range of ecological interactions at the cost of…

Probability · Mathematics 2026-01-23 Mathilde André , Félix Foutel-Rodier , Emmanuel Schertzer

The first chapter concerns monotype population models. We first study general birth and death processes and we give non-explosion and extinction criteria, moment computations and a pathwise representation. We then show how different scales…

Probability · Mathematics 2017-07-06 Vincent Bansaye , Sylvie Méléard

Consider a branching process with a homogeneous reproduction law. Sampling a single cell uniformly from the population at a time $T > 0$ and looking along the sampled cell's ancestral lineage, we find that the reproduction law is…

Populations and Evolution · Quantitative Biology 2022-05-30 David Cheek , Samuel G. G. Johnston

We consider a general class of birth-and-death processes with state space $\{0,1,2,3,\ldots\}$ which describes the size of a population going eventually to extinction with probability one. We obtain the complete spectrum of the generator of…

Probability · Mathematics 2022-04-25 J. -R. Chazottes , P. Collet , S. Méléard

Recently, there has been emerging interest in constructing reproducing kernel Banach spaces (RKBS) for applied and theoretical purposes such as machine learning, sampling reconstruction, sparse approximation and functional analysis.…

Machine Learning · Computer Science 2021-12-09 Rongrong Lin , Haizhang Zhang , Jun Zhang

We consider a system of nonlinear partial differential equations that describes an age-structured population inhabiting several temporally varying patches. We prove existence and uniqueness of solution and analyze its large-time behavior in…

Dynamical Systems · Mathematics 2017-02-21 Vladimir Kozlov , Sonja Radosavljevic , Vladimir G. Tkachev , Uno Wennergren

The young stellar population of a star-forming galaxy is the primary engine driving its radiative properties. As a result, the age of a galaxy's youngest generation of stars is critical for a detailed understanding of its star formation…

Astrophysics of Galaxies · Physics 2015-06-17 Emily M. Levesque , Claus Leitherer

Phylogenetic network is an evolutionary model that uses a rooted directed acyclic graph (instead of a tree) to model an evolutionary history of species in which reticulate events (e.g., hybrid speciation or horizontal gene transfer)…

Populations and Evolution · Quantitative Biology 2023-12-01 Yufeng Wu , Louxin Zhang

We develop a general modelling framework for compartmental epidemiological systems structured by continuous variables which are linked to the levels of expression of compartment-specific traits. We start by formulating an individual-based…

Populations and Evolution · Quantitative Biology 2025-08-14 Emanuele Bernardi , Tommaso Lorenzi , Mattia Sensi , Andrea Tosin

Despite its historical and biological stability, the sex ratio at birth (SRB) has risen in parts of the world in the last several decades. The resultant demographic consequences, mostly on sex imbalance, are well documented, typically…

Populations and Evolution · Quantitative Biology 2020-07-13 Zhen Zhang , Qiang Li

For understanding the process of star formation it is essential to know how many stars are formed as singles or in multiple systems, as a function of environment and binary parameters. This requires a characterization of the primordial…

This paper presents a disease-severity-structured epidemic model with treatment necessary only to severe infective individuals to discuss the effect of the treatment capacity on the disease transmission. It is shown that a backward…

Populations and Evolution · Quantitative Biology 2021-10-05 Hiromu Gion , Yasuhisa Saito

Capturing the structure of a population and characterising contacts within the population are key to reliable projections of infectious disease. Two main elements of population structure -- contact heterogeneity and age -- have been…

Physics and Society · Physics 2025-03-17 Luke Murray Kearney , Emma L. Davis , Matt J. Keeling

In this kind of model, the main characteristic that determines population viability in the long term is the stochastic growth rate (SGR) denoted $\lambda_S$. When $\lambda_S$ is larger than one, the population grows exponentially with…

Dynamical Systems · Mathematics 2024-02-07 Luis Sanz

A branching process in a Markovian environment consists of an irreducible Markov chain on a set of "environments" together with an offspring distribution for each environment. At each time step the chain transitions to a new random…

Probability · Mathematics 2021-06-22 Lila Greco , Lionel Levine

In an extant population, how much information do extant individuals provide on the pedigree of their ancestors? Recent work by Kim, Mossel, Ramnarayan and Turner (2020) studied this question under a number of simplifying assumptions,…

Populations and Evolution · Quantitative Biology 2022-11-29 Elchanan Mossel , David Vulakh

Sexually reproducing populations with small number of individuals may go extinct by stochastic fluctuations in sex determination, causing all their members to become male or female in a generation. In this work we calculate the time to…

Populations and Evolution · Quantitative Biology 2012-10-24 David M. Schneider , Eduardo do Carmo , Yaneer Bar-Yam , Marcus A. M. de Aguiar
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