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The rapid adoption of the Internet of Medical Things (IoMT) is transforming healthcare by enabling seamless connectivity among medical devices, systems, and services. However, it also introduces serious cybersecurity and patient safety…

Cryptography and Security · Computer Science 2026-04-06 Rahul Jaiswal , Per-Arne Andersen , Linga Reddy Cenkeramaddi , Lei Jiao , Ole-Christoffer Granmo

We address the problems of identifying malware in network telemetry logs and providing \emph{indicators of compromise} -- comprehensible explanations of behavioral patterns that identify the threat. In our system, an array of specialized…

Machine Learning · Computer Science 2021-06-24 Paul Prasse , Jan Brabec , Jan Kohout , Martin Kopp , Lukas Bajer , Tobias Scheffer

Epidemic processes are common out-of-equilibrium phenomena of broad interdisciplinary interest. Recently, dynamic message-passing (DMP) has been proposed as an efficient algorithm for simulating epidemic models on networks, and in…

Physics and Society · Physics 2015-09-30 Munik Shrestha , Samuel V. Scarpino , Cristopher Moore

The increase in the connectivity between hosts in recent times has facilitated the emergence of more aggressive mutant viral strains, making their containment and eradication significantly more challenging compared to the original variants.…

Populations and Evolution · Quantitative Biology 2025-02-27 Javier López-Pedrares , M. Elena Vázquez-Cendón , Alberto P. Muñuzuri

This tutorial introduces participants to the design and implementation of an agent-based model using NetLogo through one of two different projects: modelling T cell movement within a lymph node or modelling the progress of a viral infection…

Quantitative Methods · Quantitative Biology 2018-08-30 Catherine A. A. Beauchemin , Laura E. Liao , Kenneth Blahut

In this paper, we propose a Boltzmann-type kinetic model of the spreading of an infectious disease on a network. The latter describes the connections among countries, cities or districts depending on the spatial scale of interest. The…

Physics and Society · Physics 2021-06-25 Nadia Loy , Andrea Tosin

Infectious disease transmission is often modelled by discrete-valued stochastic state-transition processes. Due to a lack of complete data, Bayesian inference for these models often relies on data-augmentation techniques. These techniques…

Given that hierarchical count data in many fields are not Normally-distributed and include random effects, this paper extends the Generalized Linear Mixed Models (GLMMs) into Poisson Mixed-Effect Linear Model (PMELM) and do numerical…

Methodology · Statistics 2018-05-09 N. Zhang

The lack of epidemiological data in wireless sensor networks (WSNs) is a fundamental difficulty in constructing robust models to forecast and mitigate threats such as viruses and worms. Many studies have examined different epidemic models…

Machine Learning · Computer Science 2025-11-21 Chukwunonso Henry Nwokoye , Blessing Oluchi , Sharna Waldron , Peace Ezzeh

Forecasting the short-term spread of an ongoing disease outbreak is a formidable challenge due to the complexity of contributing factors, some of which can be characterized through interlinked, multi-modality variables such as…

Machine Learning · Computer Science 2024-04-11 Hongru Du , Jianan Zhao , Yang Zhao , Shaochong Xu , Xihong Lin , Yiran Chen , Lauren M. Gardner , Hao Frank Yang

Mathematical models of natural and man-made systems often have many adjustable parameters that must be estimated from multiple, potentially conflicting datasets. Rather than reporting a single best-fit parameter vector, it is often more…

Quantitative Methods · Quantitative Biology 2026-04-01 Jeffrey D. Varner

In this paper, we consider malware classification using deep learning techniques and image-based features. We employ a wide variety of deep learning techniques, including multilayer perceptrons (MLP), convolutional neural networks (CNN),…

Cryptography and Security · Computer Science 2021-03-26 Pratikkumar Prajapati , Mark Stamp

We present the analysis of the interrelation between two processes accounting for the spreading of an epidemics, and the information awareness to prevent its infection, on top of multiplex networks. This scenario is representative of an…

Physics and Society · Physics 2013-09-24 Clara Granell , Sergio Gomez , Alex Arenas

Two factors that are often ignored but could play a crucial role in the progression of an infectious disease are the distributions of inherent susceptibility ($\sigma_{inh}$) and external infectivity ($\iota_{ext}$), in a given population.…

Populations and Evolution · Quantitative Biology 2021-01-01 Saumyak Mukherjee , Sayantan Mondal , Biman Bagchi

The customary perspective to reason about epidemic mitigation in temporal networks hinges on the identification of nodes with specific features or network roles. The ensuing individual-based control strategies, however, are difficult to…

Physics and Society · Physics 2015-01-13 Laetitia Gauvin , André Panisson , Alain Barrat , Ciro Cattuto

Understanding the spatio-temporal evolution of epidemics with multiple pathogens requires not only new theoretical models but also careful analysis of their practical consequences. Building on the Multiplex Bi-Virus Reaction-Diffusion…

Physics and Society · Physics 2025-09-04 Alyssa Yu , Laura P. Schaposnik

The spread of certain diseases can be promoted, in some cases substantially, by prior infection with another disease. One example is that of HIV, whose immunosuppressant effects significantly increase the chances of infection with other…

Physics and Society · Physics 2014-08-04 M. E. J. Newman , C. R. Ferrario

NetworkDynamics.jl is an easy-to-use and computationally efficient package for working with heterogeneous dynamical systems on complex networks, written in Julia, a high-level, high-performance, dynamic programming language. By combining…

Mathematical Software · Computer Science 2021-07-02 Michael Lindner , Lucas Lincoln , Fenja Drauschke , Julia Monika Koulen , Hans Würfel , Anton Plietzsch , Frank Hellmann

Agent-based models capture heterogeneity among individuals in a population and are widely used in studies of multi-cellular systems, disease, epidemics and demography to name a few. However, existing frameworks consider discrete time-step…

Populations and Evolution · Quantitative Biology 2024-10-03 Paul Piho , Philipp Thomas

The epidemic threshold of a spreading process indicates the condition for the occurrence of the wide spreading regime, thus representing a predictor of the network vulnerability to the epidemic. Such threshold depends on the natural history…

Physics and Society · Physics 2016-01-20 Eugenio Valdano , Chiara Poletto , Vittoria Colizza