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The use of photo-activated fluorescent molecules to create long sequences of low emitter-density diffraction-limited images enables high-precision emitter localization, but at the cost of low temporal resolution. We suggest combining…

Image and Video Processing · Electrical Eng. & Systems 2023-07-19 Gili Dardikman-Yoffe , Yonina C. Eldar

We study an inverse scattering problem for Maxwell's equations in terminating waveguides, where localized reflectors are to be imaged using a remote array of sensors. The array probes the waveguide with waves and measures the scattered…

Numerical Analysis · Mathematics 2015-10-27 Liliana Borcea , Dinh-Liem Nguyen

A key to building functional devices on the basis of single molecule magnets in the framework of molecular electronics is the ability to deposit and study these molecules on a surface, because the structural, electronic and magnetic…

Mesoscale and Nanoscale Physics · Physics 2016-01-26 Judith Donner , Jan-Philipp Broschinski , Bastian Feldscher , Anja Stammler , Hartmut Bögge , Thorsten Glaser , Daniel Wegner

We suggest an approach to detect the conformation of single molecule by using the photon counting statistics. The generalized Smoluchoswki equation is employed to describe the dynamical process of conformational change of single molecule.…

Chemical Physics · Physics 2014-11-13 Yonggang Peng , Zhen-Dong Sun , Chuanlu Yang , Yujun Zheng

We discuss implications of a recent experimental breakthrough which uses a fluorescence-doped flexible semiconducting polymer to construct a single-molecule sensor which can detect ultra-weak forces in the molecular environment, with a grey…

Soft Condensed Matter · Physics 2018-02-12 Alessio Zaccone

X-ray single particle imaging involves the measurement of a large number of noisy diffraction patterns of isolated objects in random orientations. The missing information about these patterns is then computationally recovered in order to…

Image and Video Processing · Electrical Eng. & Systems 2020-05-25 Kartik Ayyer

Single image super-resolution (SISR) is the process of obtaining one high-resolution version of a low-resolution image by increasing the number of pixels per unit area. This method has been actively investigated by the research community,…

Image and Video Processing · Electrical Eng. & Systems 2022-10-11 George Corrêa de Araújo , Helio Pedrini

The refraction of light by dispersion-free dielectric media can be modeled using well-localized macroscopic wave packets, enabling a description in terms of pseudo-particles. This approach is often used in thought experiments to illustrate…

Classical Physics · Physics 2025-03-07 R. Dengler

A long-standing challenge in multiple-particle-tracking is the accurate and precise 3D localization of individual particles at close proximity. One established approach for snapshot 3D imaging is point-spread-function (PSF) engineering, in…

Image and Video Processing · Electrical Eng. & Systems 2020-10-01 Elias Nehme , Boris Ferdman , Lucien E. Weiss , Tal Naor , Daniel Freedman , Tomer Michaeli , Yoav Shechtman

Recent experimental results have shown that active enzymes can diffuse faster when they are in the presence of their substrates. Fluorescence correlation spectroscopy (FCS), which relies on analyzing the fluctuations in fluorescence…

Subcellular Processes · Quantitative Biology 2019-09-25 Mengqi Xu , Lyanne Valdez , Aysuman Sen , Jennifer L. Ross

Despite more than 100 years of study, it is unclear if the movement of proteins inside the cell is best described as a mosh pit or an exquisitely choreographed dance. Recent studies suggest the latter. Local interactions induce molecular…

Quantitative Methods · Quantitative Biology 2023-08-25 James A. Galbraith , Catherine G. Galbraith

MINFLUX is an emerging super-resolution technology that measures the position of single fluorophores with nanometer precision using fewer photons than any other fluorescence imaging or tracking technique. Here, we derive simple and…

Optics · Physics 2025-01-09 Zach Marin , Jonas Ries

Following recent advancements in multimode fiber (MMF), miniaturization of imaging endoscopes has proven crucial for minimally invasive surgery in vivo. Recent progress enabled by super-resolution imaging methods with a data-driven deep…

Optics · Physics 2023-07-12 Chuncheng Zhang , Tingting Liu , Zhihua Xie , Yu Wang , Tong Liu , Qian Chen , Xiubao Sui

Single-molecule force spectroscopy (smFS) is a powerful approach to studying molecular self-organization. However, the coupling of the molecule with the ever-present experimental device introduces artifacts, that complicates the…

Chemical Physics · Physics 2023-04-25 Lars Dingeldein , Pilar Cossio , Roberto Covino

This paper concerns the quantitative step of the medical imaging modality Thermo-acoustic Tomography (TAT). We model the radiation propagation by a system of Maxwell's equations. We show that the index of refraction of light and the…

Analysis of PDEs · Mathematics 2015-06-17 Guillaume Bal , Ting Zhou

Laser-induced alignment of particles and molecules was long envisioned to support three-dimensional structure determination using "single-molecule diffraction" with x-ray free-electron lasers [PRL 92, 198102 (2004)]. However, the alignment…

Computational Physics · Physics 2025-02-05 Muhamed Amin , Jean-Michel Hartmann , Amit K. Samanta , Jochen Küpper

This paper considers the imaging of local perturbations of an infinite penetrable periodic layer. A cell of this periodic layer consists of several bounded inhomogeneities situated in a known homogeneous media. We use \mfied{a differential…

Mathematical Physics · Physics 2018-12-26 Fioralba Cakoni , Houssem Haddar , Thi-Phong Nguyen

In this paper we broadly consider techniques which utilize projections on rays for data collection, with particular emphasis on optical techniques. We formulate a variety of imaging techniques as either special cases or extensions of…

Computer Vision and Pattern Recognition · Computer Science 2014-02-12 Keith Dillon , Yeshaiahu Fainman

Cells rely on focal adhesions (FAs) to carry out a variety of important tasks, including motion, environmental sensing, and adhesion to the extracellular matrix. Although attaining a fundamental characterization of FAs is a compelling goal,…

Fluorescence microscopy is essential in biological and medical research, providing critical insights into cellular structures. However, limited by optical diffraction and background noise, a substantial amount of hidden information is still…

Biological Physics · Physics 2026-04-14 Xiaofeng Zhang , Yongsheng Huang , Jielong Yang , Zhili Wang , Si Chen , Linbo Liu , Xin Ge