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The goal of dynamic time warping is to transform or warp time in order to approximately align two signals together. We pose the choice of warping function as an optimization problem with several terms in the objective. The first term…

Machine Learning · Computer Science 2019-06-03 Dave Deriso , Stephen Boyd

This study aims to publish a novel similarity metric to increase the speed of comparison operations. Also the new metric is suitable for distance-based operations among strings. Most of the simple calculation methods, such as string length…

Data Structures and Algorithms · Computer Science 2014-01-28 Sadi Evren Seker , Oguz Altun , Uğur Ayan , Cihan Mert

We consider a matching problem for time series with values in an arbitrary metric space, with the stretching penalty given by the Hellinger kernel. To optimize this matching, we introduce the Elastic Time Warping algorithm with a cubic…

Information Retrieval · Computer Science 2026-03-11 Yuly Billig

Within many real-world networks the links between pairs of nodes change over time. Thus, there has been a recent boom in studying temporal graphs. Recognizing patterns in temporal graphs requires a proximity measure to compare different…

Machine Learning · Computer Science 2020-07-07 Vincent Froese , Brijnesh Jain , Rolf Niedermeier , Malte Renken

We revisit a fundamental problem in string matching: given a pattern of length m and a text of length n, both over an alphabet of size $\sigma$, compute the Hamming distance between the pattern and the text at every location. Several…

Data Structures and Algorithms · Computer Science 2020-01-03 Timothy M. Chan , Shay Golan , Tomasz Kociumaka , Tsvi Kopelowitz , Ely Porat

Given a set of strings, the shortest common superstring problem is to find the shortest possible string that contains all the input strings. The problem is NP-hard, but a lot of work has gone into designing approximation algorithms for…

Data Structures and Algorithms · Computer Science 2019-12-04 Jarno Alanko , Tuukka Norri

In this paper, we propose a novel binary-based cost computation and aggregation approach for stereo matching problem. The cost volume is constructed through bitwise operations on a series of binary strings. Then this approach is combined…

Computer Vision and Pattern Recognition · Computer Science 2014-02-11 Kang Zhang , Jiyang Li , Yijing Li , Weidong Hu , Lifeng Sun , Shiqiang Yang

An algorithm (bliss) is proposed to speed up the construction of slow adaptive walks. Slow adaptive walks are adaptive walks biased towards closer points or smaller move steps. They were previously introduced to explore a search space, e.g.…

Neural and Evolutionary Computing · Computer Science 2012-06-26 Susan Khor

The computation of the distance of two time series is time-consuming for any elastic distance function that accounts for misalignments. Among those functions, DTW is the most prominent. However, a recent extensive evaluation has shown that…

Data Structures and Algorithms · Computer Science 2023-04-21 Jana Holznigenkemper , Christian Komusiewicz , Bernhard Seeger

In this paper, we aim to learn a mapping (or embedding) from images to a compact binary space in which Hamming distances correspond to a ranking measure for the image retrieval task. We make use of a triplet loss because this has been shown…

Computer Vision and Pattern Recognition · Computer Science 2016-08-02 Bohan Zhuang , Guosheng Lin , Chunhua Shen , Ian Reid

In this study, we analyzed the problem of accelerating the linear average consensus algorithm for complex networks. We propose a data-driven approach to tuning the weights of temporal (i.e., time-varying) networks using deep learning…

Optimization and Control · Mathematics 2023-08-29 Masako Kishida , Masaki Ogura , Yuichi Yoshida , Tadashi Wadayama

We study the fundamental problem of high-dimensional mean estimation in a robust model where a constant fraction of the samples are adversarially corrupted. Recent work gave the first polynomial time algorithms for this problem with…

Machine Learning · Computer Science 2018-11-26 Yu Cheng , Ilias Diakonikolas , Rong Ge

Grammar-based compression, where one replaces a long string by a small context-free grammar that generates the string, is a simple and powerful paradigm that captures many popular compression schemes. Given a grammar, the random access…

Data Structures and Algorithms · Computer Science 2016-11-17 Philip Bille , Anders Roy Christiansen , Patrick Hagge Cording , Inge Li Gørtz

The problem of high-dimensional path-dependent optimal stopping (OS) is important to multiple academic communities and applications. Modern OS tasks often have a large number of decision epochs, and complicated non-Markovian dynamics,…

Probability · Mathematics 2024-05-16 David A. Goldberg , Yilun Chen

The literature postulates that the dynamic time warping (dtw) distance can cope with temporal variations but stores and processes time series in a form as if the dtw-distance cannot cope with such variations. To address this inconsistency,…

Machine Learning · Computer Science 2019-03-11 Brijnesh Jain

We revisit classic string problems considered in the area of parameterized complexity, and study them through the lens of dynamic data structures. That is, instead of asking for a static algorithm that solves the given instance efficiently,…

Data Structures and Algorithms · Computer Science 2022-05-03 Jędrzej Olkowski , Michał Pilipczuk , Mateusz Rychlicki , Karol Węgrzycki , Anna Zych-Pawlewicz

Finding an Approximate Longest Common Substring (ALCS) within a given set $S=\{s_1,s_2,\ldots,s_m\}$ of $m \ge 2$ strings is a key problem in computational biology, such as identifying related mutations across multiple genetic sequences. We…

Data Structures and Algorithms · Computer Science 2025-09-22 Hamed Hasibi , Neerja Mhaskar , W. F. Smyth

Here we study the complexity of string problems as a function of the size of a program that generates input. We consider straight-line programs (SLP), since all algorithms on SLP-generated strings could be applied to processing…

Data Structures and Algorithms · Computer Science 2007-05-23 Yury Lifshits

The Longest Common Subsequence (LCS) is a fundamental string similarity measure, and computing the LCS of two strings is a classic algorithms question. A textbook dynamic programming algorithm gives an exact algorithm in quadratic time, and…

Data Structures and Algorithms · Computer Science 2023-02-13 Xiaoyu He , Ray Li

Given a finite metric space $(X\cup Y, \mathbf{d})$ the $k$-median problem is to find a set of $k$ centers $C\subseteq Y$ that minimizes $\sum_{p\in X} \min_{c\in C} \mathbf{d}(p,c)$. In general metrics, the best polynomial time algorithm…

Data Structures and Algorithms · Computer Science 2026-03-26 Anne Driemel , Jan Höckendorff , Ioannis Psarros , Christian Sohler , Di Yue