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To adapt their behaviour in changing environments, cells sense concentrations by binding external ligands to their receptors. However, incorrect ligands may bind nonspecifically to receptors, and when their concentration is large, this…

Molecular Networks · Quantitative Biology 2015-07-23 Thierry Mora

We observe a $n$-sample, the distribution of which is assumed to belong, or at least to be close enough, to a given mixture model. We propose an estimator of this distribution that belongs to our model and possesses some robustness…

Statistics Theory · Mathematics 2025-02-06 Alexandre Lecestre

A growing body of theoretical and empirical evidence shows that the global steady-state distributions of many equilibrium and nonequilibrium systems approximately satisfy an analogue of the Boltzmann distribution, with a local dynamical…

Statistical Mechanics · Physics 2025-12-03 Jacob Calvert , Dana Randall

We derive a distribution function for the position of a tagged active particle in a slowly varying in space external potential, in a system of interacting active particles. The tagged particle distribution has the form of the Boltzmann…

Soft Condensed Matter · Physics 2024-06-19 Alireza Shakerpoor , Elijah Flenner , Grzegorz Szamel

A framework for relativistic thermodynamics and statistical physics is built by first exploiting the symmetries between energy and momentum in the derivation of the Boltzmann distribution, then using Einstein's energy-momentum relationship…

Statistical Mechanics · Physics 2020-07-09 Alexander Taskov

In this perspective we consider how modern statistical mechanics and response theory can be applied to understand the response of polar molecules to an applied electric field and the fluctuations in these systems. Results that are…

Statistical Mechanics · Physics 2024-01-08 Debra J. Searles , Stephen Sanderson

We find the probability density function $\mathcal{P}(V_{\texttt{r}})$ of the relativistic relative velocity for two colliding particles in a non-degenerate relativistic gas. The distribution reduces to Maxwell distribution for the relative…

Cosmology and Nongalactic Astrophysics · Physics 2014-06-02 M. Cannoni

For localized and oriented vibrationally excited molecules, the one-body probability density of the nuclei (one-nucleus density) is studied. Like the familiar and widely used one-electron density that represents the probability of finding…

Chemical Physics · Physics 2019-02-21 Axel Schild

For entropy driven balanced processes we obtain final states with Poisson, Bernoulli, negative binomial and P\'olya distributions. We apply this both for complex networks and particle production. For random networks we follow the evolution…

Statistical Mechanics · Physics 2017-03-08 Tamás S. Biró , Zoltán Néda

Cell membranes interact via anchored receptor and ligand molecules. Central questions on cell adhesion concern the binding affinity of these membrane-anchored molecules, the mechanisms leading to the receptor-ligand domains observed during…

Soft Condensed Matter · Physics 2009-06-10 Thomas R. Weikl , Mesfin Asfaw , Heinrich Krobath , Bartosz Rozycki , Reinhard Lipowsky

Cellular functions are established through biological evolution, but are constrained by the laws of physics. For instance, the physics of protein folding limits the lengths of cellular polypeptide chains. Consequently, many cellular…

Biological Physics · Physics 2019-07-09 Pablo Sartori , Stanislas Leibler

The Muttalib-Borodin ensemble is a probability density function for $n$ particles on the positive real axis that depends on a parameter $\theta$ and a weight $w$. We consider a varying exponential weight that depends on an external field…

Classical Analysis and ODEs · Mathematics 2021-07-07 L. D. Molag

We introduce a hierarchy of conditions necessarily satisfied by any distribution P(ab) representing the probabilities for two separate observers to obtain outcomes a and b when making local measurements on a shared quantum state. Each…

Quantum Physics · Physics 2008-03-30 Miguel Navascues , Stefano Pironio , Antonio Acin

Our work introduces an approach for estimating the contribution of attachment mechanisms to the formation of growing networks. We present a generic model in which growth is driven by the continuous attachment of new nodes according to…

Probability · Mathematics 2019-02-20 Jan Medina , Jorge Finke , Camilo Rocha

For a quasi-molecular mechanism of cosmological recombination, a scheme of calculation based on a rigorous quantum-mechanical approach is elaborated. The probability of free-bound radiative transition into an excited state of a…

Cosmology and Nongalactic Astrophysics · Physics 2023-08-01 Tamaz Kereselidze , Irakli Noselidze , Zaal Machavariani

The probability distribution function for thermodynamics and econophysics is obtained by solving an equilibrium equation. This approach is different from the common one of optimizing the entropy of the system or obtaining the state of…

General Physics · Physics 2007-05-23 Diego Saa

Multivalent particles competing for binding on the same surface can exhibit switch-like behaviour, depending on the concentration of receptors on the surface. When the receptor concentration is low, energy dominates the free energy of…

Soft Condensed Matter · Physics 2016-08-24 Nicholas B. Tito , Daan Frenkel

Large and complex molecules are building blocks for life. We compute probabilities for their formation from an average non-equilibrium model. As the distance from thermodynamic equilibrium is increased in this model, so too are the chances…

Biological Physics · Physics 2019-05-08 Elan Stopnitzky , Susanne Still

A fundamental tool in network information theory is the covering lemma, which lower bounds the probability that there exists a pair of random variables, among a give number of independently generated candidates, falling within a given set.…

Information Theory · Computer Science 2019-04-18 Jingbo Liu , Mohammad H. Yassaee , Sergio Verdú

Computing equilibrium concentrations of molecular complexes is generally analytically intractable and requires numerical approaches. In this work we focus on the polymer-monomer level, where indivisible molecules (monomers) combine to form…

Data Structures and Algorithms · Computer Science 2025-08-25 Hamidreza Akef , Minki Hhan , David Soloveichik