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Turbulence has been recognized as a factor of paramount importance for the survival or extinction of sinking phytoplankton species. However, dealing with its multiscale nature in models of coupled fluid and biological dynamics is a…

Fluid Dynamics · Physics 2021-12-10 Vinicius Beltram Tergolina , Enrico Calzavarini , Gilmar Mompean , Stefano Berti

Plankton dynamics depend in a complex manner on a variety of physical phenomena, according to both experimental and numerical data. In particular, experimental field studies have highlighted the relation between phytoplankton survival and…

Fluid Dynamics · Physics 2023-01-05 Vinicius Beltram Tergolina , Enrico Calzavarini , Gilmar Mompean , Stefano Berti

The vertical distribution of phytoplankton is of fundamental importance for the dynamics and structure of aquatic communities. Here, using an advection-reaction-diffusion model, we investigate the distribution and competition of…

Populations and Evolution · Quantitative Biology 2010-03-09 Alexei B. Ryabov , Lars Rudolf , Bernd Blasius

Resource competition in heterogeneous environments is still an unresolved problem of theoretical ecology. In this article I analyze competition between two phytoplankton species in a deep water column, where the distributions of main…

Populations and Evolution · Quantitative Biology 2012-01-26 Alexei B. Ryabov

The spatio-temporal dynamics of a population present one of the most fascinating aspects and challenges for ecological modelling. In this article we review some simple mathematical models, based on one dimensional…

Populations and Evolution · Quantitative Biology 2008-11-18 A. B. Ryabov , B. Blasius

In this paper, we establish a reaction-diffusion-advection partial differential equation model to describe the growth of algae depending on both nutrients and inorganic carbon in a poorly mixed water column. Nutrients from the water bottom…

Populations and Evolution · Quantitative Biology 2020-02-10 Jimin Zhang , Junping Shi , Xiaoyuan Chang

We study a predator-prey model of plankton dynamics in the two and three-dimensional wakes of turbulent flows behind a cylinder, focusing on the impact of the three-dimensional character of the carrying velocity field on population variance…

Fluid Dynamics · Physics 2022-01-31 Alice Jaccod , Stefano Berti , Enrico Calzavarini , Sergio Chibbaro

In the subtropical gyres, phytoplankton rely on eddies for transporting nutrients from depth to the euphotic zone. But, what controls the rate of nutrient supply for new production? We show that vertical nutrient flux depends both on the…

Populations and Evolution · Quantitative Biology 2022-03-02 Mara Freilich , Glenn Flierl , Amala Mahadevan

The motility skills of phytoplankton have evolved and persisted over millions of years, primarily in response to factors such as nutrient and light availability, temperature and viscosity gradients, turbulence, and predation pressure.…

Biological Physics · Physics 2025-08-12 Peyman Fahimi , Andrew J. Irwin , Michael Lynch

Marine chlorophyll which is present within phytoplankton are the basis of photosynthesis and they have a high significance in sustaining ecological balance as they highly contribute toward global primary productivity and comes under the…

Quantitative Methods · Quantitative Biology 2023-04-26 Subhrangshu Adhikary , Sudhir Kumar Chaturvedi , Saikat Banerjee , Sourav Basu

We model evolution of plants in a world, made up of different locations, with multiple environments (mutually exclusive and collectively exhaustive subsets of locations). Each environment (landmass) has temperature, rainfall, and other…

Populations and Evolution · Quantitative Biology 2019-05-27 Alexander , Khazatsky , Albert Yu , Zihao Zhao , Gabe Zuckerman

The growth of a crystal is usually determined by its surface. Many factors influence the growth dynamics. Energy barriers associated with the presence of steps most often decide about the emerging pattern. The height and type of…

Materials Science · Physics 2023-12-08 Marta Anna Chabowska , Magdalena A. Załuska-Kotur

Marine species reproduce and compete while being advected by turbulent flows. It is largely unknown, both theoretically and experimentally, how population dynamics and genetics are changed by the presence of fluid flows. Discrete…

Populations and Evolution · Quantitative Biology 2019-12-24 Giorgia Guccione , Roberto Benzi , Abigail Plummer , Federico Toschi

An extension of the Truscott-Brindley model (Bull. Math. Biol. {\bf 56}, 981 (1994)) is derived to account for the effect of demographic fluctuations. In the presence of seasonal forcing, and sufficiently shallow water conditions, the…

Populations and Evolution · Quantitative Biology 2015-06-05 Piero Olla

The impact of environmental fluctuation on species diversity is studied with a model of the evolutionary ecology of microorganisms. We show that environmental fluctuation induces evolutionary branching and assures the consequential…

Populations and Evolution · Quantitative Biology 2015-05-13 Masashi Tachikawa

In this article, we study in details the fluid dynamics system proposed in Clarelli et al (2013) to model the formation of cyanobacteria biofilms. After analyzing the linear stability of the unique non trivial equilibrium of the system, we…

Fluid Dynamics · Physics 2014-08-12 Fabrizio Clarelli , Cristiana Di Russo , Roberto Natalini , Magali Ribot

The paradox of the plankton highlights the apparent contradiction between Gause's law of competitive exclusion and the observed diversity of phytoplankton. It is well known that phytoplankton dynamics depend heavily on two main resources:…

Populations and Evolution · Quantitative Biology 2021-09-07 Christopher M. Heggerud , King-Yeung Lam , Hao Wang

The role of the selection pressure and mutation amplitude on the behavior of a single-species population evolving on a two-dimensional lattice, in a periodically changing environment, is studied both analytically and numerically. The…

Populations and Evolution · Quantitative Biology 2009-11-13 Ioana Bena , Michel Droz , Janusz Szwabinski , Andrzej Pekalski

We analyze evolutionary dynamics in a confluent, branching cellular population, such as in a growing duct, vasculature, or in a branching microbial colony. We focus on the coarse-grained features of the evolution and build a statistical…

Populations and Evolution · Quantitative Biology 2022-02-15 Adam S. Bryant , Maxim O. Lavrentovich

Lotus leaves floating on water usually experience short-wavelength edge wrinkling that decays toward the center, while the leaves growing above water normally morph into a global bending cone shape with long rippled waves near the edge.…

Soft Condensed Matter · Physics 2020-01-28 Fan Xu , Chenbo Fu , Yifan Yang
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