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My analysis uses methods developed for data mining microarray experiments, adapted for ageing research. Methods bridge knowledge of statistical mechanics with data mining methods developed in statistical mathematics. Analyses can reveal how…

Quantitative Methods · Quantitative Biology 2012-12-11 Diana David-Rus

The management of natural environments, whether for conservation or production, requires a deep understanding of wildlife. The number, location, and behavior of wild animals are among the main subjects of study in ecology and wildlife…

Computer Vision and Pattern Recognition · Computer Science 2025-02-07 Federico Gonzalez , Leonel Viera , Rosina Soler , Lucila Chiarvetto Peralta , Matias Gel , Gimena Bustamante , Abril Montaldo , Brian Rigoni , Ignacio Perez

Systems neuroscience relies on two complementary views of neural data, characterized by single neuron tuning curves and analysis of population activity. These two perspectives combine elegantly in neural latent variable models that…

There exist very few ways to isolate cognitive processes, historically defined via highly controlled laboratory studies, in more ecologically valid contexts. Specifically, it remains unclear as to what extent patterns of neural activity…

Neurons and Cognition · Quantitative Biology 2023-10-13 Stephen M. Gordon , Jonathan R. McDaniel , Kevin W. King , Vernon J. Lawhern , Jonathan Touryan

Model ensembles have long been a cornerstone for improving generalization and robustness in deep learning. However, their effectiveness often comes at the cost of substantial computational overhead. To address this issue, state-of-the-art…

Most deep-learning frameworks for understanding biological swarms are designed to fit perceptive models of group behavior to individual-level data (e.g., spatial coordinates of identified features of individuals) that have been separately…

Computational Engineering, Finance, and Science · Computer Science 2021-08-24 Taeyeong Choi , Benjamin Pyenson , Juergen Liebig , Theodore P. Pavlic

Our understanding of the neural basis of locomotor behavior can be informed by careful quantification of animal movement. Classical descriptions of legged locomotion have defined discrete locomotor gaits, characterized by distinct patterns…

Neurons and Cognition · Quantitative Biology 2022-03-02 Ana I. Gonçalves , Jacob A. Zavatone-Veth , Megan R. Carey , Damon A. Clark

Sometimes a simple and fast algorithm is required to detect human presence and movement with a low error rate in a controlled environment for security purposes. Here a light weight algorithm has been presented that generates alert on…

Computer Vision and Pattern Recognition · Computer Science 2015-07-01 Merina Kundu , Dhriti Sengupta , Jayati Ghosh Dastidar

Studying the cellular architecture of the human cerebral cortex is critical for understanding brain organization and function. It requires investigating complex texture patterns in histological images, yet automatic methods that scale…

Neurons and Cognition · Quantitative Biology 2026-03-06 Christian Schiffer , Zeynep Boztoprak , Jan-Oliver Kropp , Julia Thönnißen , Katia Berr , Hannah Spitzer , Katrin Amunts , Timo Dickscheid

One of the biggest challenges in biology is to understand how activity at the cellular level of neurons, as a result of their mutual interactions, leads to the observed behavior of an organism responding to a variety of environmental…

Neurons and Cognition · Quantitative Biology 2010-03-09 Raj Kumar Pan , Nivedita Chatterjee , Sitabhra Sinha

Recognition problems in long-tailed data, in which the sample size per class is heavily skewed, have gained importance because the distribution of the sample size per class in a dataset is generally exponential unless the sample size is…

Machine Learning · Computer Science 2024-04-30 Naoya Hasegawa , Issei Sato

Animal behavior analysis plays a crucial role in various fields, such as life science and biomedical research. However, the scarcity of available data and the high cost associated with obtaining a large number of labeled datasets pose…

Computer Vision and Pattern Recognition · Computer Science 2023-12-14 Chen Yang , Jeremy Forest , Matthew Einhorn , Thomas A. Cleland

Observation is an essential tool for understanding and studying human behavior and mental states. However, coding human behavior is a time-consuming, expensive task, in which reliability can be difficult to achieve and bias is a risk.…

Computer Vision and Pattern Recognition · Computer Science 2022-07-12 Flavia D. Frumosu , Nicole N. Lønfeldt , A. -R. Cecilie Mora-Jensen , Sneha Das , Nicklas Leander Lund , A. Katrine Pagsberg , Line K. H. Clemmensen

We propose a novel framework for image clustering that incorporates joint representation learning and clustering. Our method consists of two heads that share the same backbone network - a "representation learning" head and a "clustering"…

Computer Vision and Pattern Recognition · Computer Science 2021-07-27 Kien Do , Truyen Tran , Svetha Venkatesh

Encounter-based network is a frequently-disconnected wireless ad-hoc network requiring immediate neighbors to store and forward aggregated data for information disseminations. Using traditional approaches such as gateways or firewalls for…

Networking and Internet Architecture · Computer Science 2007-06-28 Sapon Tanachaiwiwat , Ahmed Helmy

We investigate the adaptation and performance of modularity-based algorithms, designed in the scope of complex networks, to analyze the mesoscopic structure of correlation matrices. Using a multi-resolution analysis we are able to describe…

Data Analysis, Statistics and Probability · Physics 2011-03-31 Clara Granell , Sergio Gomez , Alex Arenas

Nematode worms are one of most abundant metazoan groups on the earth, occupying diverse ecological niches. Accurate recognition or identification of nematodes are of great importance for pest control, soil ecology, bio-geography, habitat…

Quantitative Methods · Quantitative Biology 2021-03-16 Xuequan Lu , Yihao Wang , Sheldon Fung , Xue Qing

Random walks can reveal communities or clusters in networks, because they are more likely to stay within a cluster than leave it. Thus, one family of community detection algorithms uses random walks to measure distance between pairs of…

Disordered Systems and Neural Networks · Physics 2023-08-11 Eric Chalmers , Artur Luczak

Quantifying behavior is crucial for many applications in neuroscience. Videography provides easy methods for the observation and recording of animal behavior in diverse settings, yet extracting particular aspects of a behavior for further…

Computer Vision and Pattern Recognition · Computer Science 2018-08-24 Alexander Mathis , Pranav Mamidanna , Taiga Abe , Kevin M. Cury , Venkatesh N. Murthy , Mackenzie W. Mathis , Matthias Bethge