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Collective epithelial migration leverages on topological rearrangements of the intercellular junctions, which allow cells to intercalate without loosing confluency. In silico studies have provided a clear indication that this process could…

Soft Condensed Matter · Physics 2025-02-14 Leonardo Puggioni , Dimitrios Krommydas , Luca Giomi

We propose an ``active XY model'' that incorporates key elements of both the classical XY model and the Vicsek model to study the role of topological defects in active matter systems. This model features self-propelled particles with XY…

Soft Condensed Matter · Physics 2026-04-17 Shun Inoue , Satoshi Yukawa

Grain boundaries in extremely confined colloidal smectics possess a topological fine structure with coexisting nematic and tetratic symmetry of the director field. An alternative way to approach the problem of smectic topology is via the…

Soft Condensed Matter · Physics 2024-04-24 René Wittmann

Using computer simulations we investigate the microscopic structure of the singular director field within a nematic droplet. As a theoretical model for nematic liquid crystals we take hard spherocylinders. To induce an overall topological…

Soft Condensed Matter · Physics 2009-10-31 J. Dzubiella , M. Schmidt , H. Loewen

Chemical design of block copolymers makes it possible to create polymer vesicles with tunable microscopic structure. Here we focus on a model of a vesicle made of smectic liquid-crystalline block copolymers at zero temperature. The vesicle…

Soft Condensed Matter · Physics 2018-12-19 Francesco Serafin , Mark J. Bowick , Sidney R. Nagel

In nature, microorganisms must often cope with hostile environmental conditions. To do so they have developed sophisticated cooperative behavior and intricate communication capabilities, such as: direct cell-cell physical interactions via…

Condensed Matter · Physics 2007-05-23 Eshel Ben-Jacob , Inon Cohen , Ido Golding , Yonathan Kozlovsky

In culture migrating and interacting amoeboid cells can form nematic liquid crystal phases. A polar nematic liquid crystal is formed if the interaction has a polar symmetry. One type of white blood cells (granulocytes) form clusters where…

Biological Physics · Physics 2007-05-23 Ralf Kemkemer , Dieter Kling , Dieter Kaufmann , Hans Gruler

We consider active nematodynamics on deformable surfaces. Based on a thermodynamically consistent surface Beris-Edwards model we add nematic activity and focus on the emerging additional coupling mechanism between the nematic field, the…

Soft Condensed Matter · Physics 2024-05-24 Ingo Nitschke , Axel Voigt

Active materials are capable of converting free energy into directional motion, giving rise to striking dynamical phenomena. Developing a general understanding of their structure in relation to the underlying non-equilibrium physics would…

Soft Condensed Matter · Physics 2018-10-17 Nitin Kumar , Rui Zhang , Juan J. de Pablo , Margaret L. Gardel

We study the phase ordering colloids suspended in a thermotropic nematic liquid crystal below the clearing point Tni and the resulting aggregated structure. Small (150nm) PMMA particles are dispersed in a classical liquid crystal matrix,…

Soft Condensed Matter · Physics 2007-05-23 V. J. Anderson , E. M. Terentjev , S. P. Meeker , J. Crain , W. C. K. Poon

Cell layers eliminate unwanted cells through the extrusion process, which underlines healthy versus flawed tissue behaviors. Although several biochemical pathways have been identified, the underlying mechanical basis including the forces…

Soft Condensed Matter · Physics 2023-04-20 Siavash Monfared , Guruswami Ravichandran , Jose E. Andrade , Amin Doostmohammadi

Topological defects in systems with liquid-crystalline order are crucial in determining their large-scale properties. In active systems, they are known to have properties impossible at equilibrium: for example, $+1/2$ defects in…

Soft Condensed Matter · Physics 2026-02-17 Giacomo Marco La Montagna , Sumeja Burekovic , Ananyo Maitra , Cesare Nardini

The growing interest in active nematics and the emerging evidence of the relevance of topological defects in biology asks for reliable data analysis tools to identify, classify and track such defects in simulation and microscopy data. We…

Soft Condensed Matter · Physics 2020-02-10 Dennis Wenzel , Michael Nestler , Sebastian Reuther , Maximilian Simon , Axel Voigt

We present experimental results in which a quasimonolayer of grains, shaped as equilateral triangular prisms, is vertically vibrated within circular and square confining cavities. The system exhibits a fluid phase characterized by sixfold…

Soft Condensed Matter · Physics 2025-05-13 Jorge Vega , Enrique Velasco , Yuri Martinez-Raton

Regulation of topological structures and pattern formation is attracting wide interest in the field of condensed matter. Liquid crystals (LCs) represent soft matter with a remarkable combination of fluidity and anisotropic properties.…

Soft Condensed Matter · Physics 2025-12-09 Natalia Podoliak , Lubor Lejcek , Martin Cigl , Vladimira Novotna

Growth processes in many living organisms create thin, soft materials with an intrinsically hyperbolic geometry. These objects support novel types of mesoscopic defects - discontinuity lines for the second derivative and branch points -…

Soft Condensed Matter · Physics 2020-05-26 Amit Acharya , Shankar C. Venkataramani

We develop a continuum theory to describe the collective dynamics of deformable epithelial cells, using two tensor order parameters to distinguish the force-generating active filaments in the cells from their shape. The theory demonstrates…

Soft Condensed Matter · Physics 2025-01-13 Mehrana R. Nejad , Julia M. Yeomans , Sumesh P Thampi

Active living matter continuously creates and annihilates topological defects in a process that remains poorly understood. Here, we investigate these dynamics in two distinct active living systems: swarming bacteria and human bronchial…

The prevalence of multicellular organisms is due in part to their ability to form complex structures. How cells pack in these structures is a fundamental biophysical issue, underlying their functional properties. However, much remains…

Epithelial monolayers are a central building block of complex organisms. Topological defects have emerged as important elements for single cell behavior in flat epithelia. Here we theoretically study such defects in a three-dimensional…

Biological Physics · Physics 2025-02-19 Oliver M. Drozdowski , Ulrich S. Schwarz