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Related papers: EoN (Epidemics on Networks): a fast, flexible Pyth…

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The spread of viruses in biological networks, computer networks, and human contact networks can have devastating effects; developing and analyzing mathematical models of these systems can be insightful and lead to societal benefits. Prior…

Optimization and Control · Mathematics 2016-09-19 Philip E. Paré , Angelia Nedić , Carolyn L. Beck

Understanding individual decisions in a world where communications and information move instantly via cell phones and the internet, contributes to the development and implementation of policies aimed at stopping or ameliorating the spread…

Physics and Society · Physics 2020-03-31 Asma Azizi , Cesar Montalvo , Baltazar Espinoza , Yun Kang , Carlos Castillo-Chavez

Global transport and communication networks enable information, ideas and infectious diseases now to spread at speeds far beyond what has historically been possible. To effectively monitor, design, or intervene in such epidemic-like…

Physics and Society · Physics 2020-02-13 Sam Moore , Tim Rogers

We study the dynamics of epidemic spreading processes aimed at spontaneous dissemination of information updates in populations with complex connectivity patterns. The influence of the topological structure of the network in these processes…

Statistical Mechanics · Physics 2009-11-10 Yamir Moreno , Maziar Nekovee , Alessandro Vespignani

The recently proposed generalized epidemic modeling framework (GEMF) \cite{sahneh2013generalized} lays the groundwork for systematically constructing a broad spectrum of stochastic spreading processes over complex networks. This article…

Physics and Society · Physics 2016-04-11 Faryad Darabi Sahneh , Aram Vajdi , Heman Shakeri , Futing Fan , Caterina Scoglio

We study the diffusion of epidemics on networks that are partitioned into local communities. The gross structure of hierarchical networks of this kind can be described by a quotient graph. The rationale of this approach is that individuals…

Social and Information Networks · Computer Science 2016-01-19 Stefano Bonaccorsi , Stefania Ottaviano , Delio Mugnolo , Francesco De Pellegrini

In epidemiology, traditional statistical methods such as logistic regression, linear regression, and other parametric models are commonly employed to investigate associations between predictors and health outcomes. However, non-parametric…

Machine Learning · Computer Science 2025-01-20 Jean-Baptiste Guimbaud , Marc Plantevit , Léa Maître , Rémy Cazabet

In many cases, tainted information in a computer network can spread in a way similar to an epidemics in the human world. On the other had, information processing paths are often redundant, so a single infection occurrence can be easily…

Physics and Society · Physics 2024-03-07 Franco Bagnoli , Emanuele Bellini , Emanuele Massaro

Mathematical modeling of epidemic propagation on networks is extended to hypergraphs in order to account for both the community structure and the nonlinear dependence of the infection pressure on the number of infected neighbours. The exact…

Dynamical Systems · Mathematics 2016-10-31 Ágnes Bodó , Gyula Y. Katona , Péter L. Simon

OSMnx is a Python package for downloading, modeling, analyzing, and visualizing urban networks and any other geospatial features from OpenStreetMap data. A large and growing body of literature uses it to conduct scientific studies across…

Physics and Society · Physics 2025-05-05 Geoff Boeing

When an epidemic spreads into a population, it is often unpractical or impossible to have a continuous monitoring of all subjects involved. As an alternative, algorithmic solutions can be used to infer the state of the whole population from…

Populations and Evolution · Quantitative Biology 2021-05-12 Abhishek Tomy , Matteo Razzanelli , Francesco Di Lauro , Daniela Rus , Cosimo Della Santina

Many models of virus propagation in Computer Networks inspired by {\bf SIS,SIR,}\\ {\bf SEIR}, etc. epidemic disease propagation mathematical models that can be found in the epidemiology field have been proposed in the last two decades. The…

Optimization and Control · Mathematics 2021-01-05 Carlos Rodriguez Lucatero

The study of social networks, and in particular the spread of disease on networks, has attracted considerable recent attention in the physics community. In this paper, we show that a large class of standard epidemiological models, the…

Statistical Mechanics · Physics 2007-05-23 M. E. J. Newman

A problem closely related to epidemiology, where a subgraph of 'infected' links is defined inside a larger network, is investigated. This subgraph is generated from the underlying network by a random variable, which decides whether a link…

Physics and Society · Physics 2016-04-07 M Cotacallapa , M O Hase

In this paper we quantify the total economic impact of an epidemic over a complex network using tools from random matrix theory. Incorporating the direct and indirect costs of infection, we calculate the disease cost in the large graph…

Social and Information Networks · Computer Science 2013-09-10 Subhonmesh Bose , Elizabeth Bodine-Baron , Babak Hassibi , Adam Wierman

The (py)LIon package is a set of tools to simulate the classical trajectories of ensembles of ions in electrodynamic traps. Molecular dynamics simulations are performed using LAMMPS, an efficient and feature-rich program. (py)LIon has been…

Computational Physics · Physics 2023-07-20 E. Bentine , C. J. Foot , D. Trypogeorgos

We introduce EINNs, a framework crafted for epidemic forecasting that builds upon the theoretical grounds provided by mechanistic models as well as the data-driven expressibility afforded by AI models, and their capabilities to ingest…

Machine Learning · Computer Science 2023-01-12 Alexander Rodríguez , Jiaming Cui , Naren Ramakrishnan , Bijaya Adhikari , B. Aditya Prakash

Network epidemiology has become a core framework for investigating the role of human contact patterns in the spreading of infectious diseases. In network epidemiology represents the contact structure as a network of nodes (individuals)…

Populations and Evolution · Quantitative Biology 2014-06-10 Petter Holme

We consider the problem of identifying the source of an epidemic, spreading through a network, from a complete observation of the infected nodes in a snapshot of the network. Previous work on the problem has often employed geometric,…

Social and Information Networks · Computer Science 2019-06-13 S. Jalil Kazemitabar , Arash A. Amini

Cyber Resilience is an important property of complex systems and is important consideration in developing specific IoT applications. This work aims at introducing a novel approach to assess IoT resilience adopting the risk perception in…

Networking and Internet Architecture · Computer Science 2021-09-24 Emanuele Bellini , Franco Bagnoli , Alexander A. Ganin , Igor Linkov