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While Flory theories provide an extremely useful framework for understanding the behavior of interacting, randomly branching polymers, the approach is inherently limited. Here we use a combination of scaling arguments and computer…

Statistical Mechanics · Physics 2017-01-18 Angelo Rosa , Ralf Everaers

Randomly branching polymers with {\em annealed} connectivity are model systems for ring polymers and chromosomes. In this context, the branched structure represents transient folding induced by topological constraints. Here we present…

Statistical Mechanics · Physics 2016-11-03 Angelo Rosa , Ralf Everaers

We present computer simulations of three systems of randomly branching polymers in d=3 dimensions: ideal trees and self-avoiding trees with annealed and quenched connectivities. In all cases, we performed a detailed analysis of trees…

Statistical Mechanics · Physics 2016-10-11 Angelo Rosa , Ralf Everaers

We consider flexible branched polymer, with quenched branch structure, and show that its conformational entropy as a function of its gyration radius $R$, at large $R$, obeys, in the scaling sense, $\Delta S \sim R^2/(a^2L)$, with $a$ bond…

Statistical Mechanics · Physics 2015-09-02 Alexander Y. Grosberg , Sergei K. Nechaev

A directed polymer is allowed to branch, with configurations determined by global energy optimization and disorder. A finite size scaling analysis in 2D shows that, if disorder makes branching more and more favorable, a critical transition…

Statistical Mechanics · Physics 2016-08-31 Giovanni Sartoni , Attilio L. Stella

Formation of base pairs between the nucleotides of an RNA sequence gives rise to a complex and often highly branched RNA structure. While numerous studies have demonstrated the functional importance of the high degree of RNA branching --…

Biological Physics · Physics 2023-06-21 Domen Vaupotič , Angelo Rosa , Luca Tubiana , Anže Božič

We study asymptotic properties of diffusion and other transport processes (including self-avoiding walks and electrical conduction) on large randomly branched polymers using renormalized dynamical field theory. We focus on the swollen phase…

Statistical Mechanics · Physics 2015-06-04 Hans-Karl Janssen , Olaf Stenull

Recent developments of microscopic mechanical experiments allow the manipulation of individual polymer molecules in two main ways: \textit{uniform} stretching by external forces and \textit{non-uniform} stretching by external fields. Many…

Biological Physics · Physics 2015-06-11 Fabio Manca , Stefano Giordano , Pier Luca Palla , Fabrizio Cleri , Luciano Colombo

We investigate the statistical properties of a randomly branched 3--functional $N$--link polymer chain without excluded volume, whose one point is fixed at the distance $d$ from the impenetrable surface in a 3--dimensional space. Exactly…

Statistical Mechanics · Physics 2009-11-10 M. V. Tamm , S. K. Nechaev , I. Ya. Erukhimovich

In this paper we study the shape characteristics of a polymer chain in a good solvent using a mesoscopic level of modelling. The dissipative particle dynamics simulations are performed in the $3D$ space at a range of chain lengths $N$. The…

Soft Condensed Matter · Physics 2016-11-24 Ostap Kalyuzhnyi , Jaroslav Ilnytskyi , Yurij Holovatch , Christian von Ferber

We study the statistics of branching polymers with excluded-volume interactions, by modeling them as single self-avoiding trees on a generic regular periodic lattice with coordination number $q$. Each lattice site can be occupied at most by…

Statistical Mechanics · Physics 2025-10-13 Davide Marcato , Achille Giacometti , Amos Maritan , Angelo Rosa

We consider the simplest representative of the class of multiply branched polymer macromolecules, known as a pom-pom structure. The molecule consists of a backbone linear chain terminated by two branching points with functionalities…

Soft Condensed Matter · Physics 2020-12-02 Khristine Haydukivska , Ostap Kalyuzhnyi , Viktoria Blavatska , Jaroslav Ilnytskyi

The statistics of randomly branching double-folded ring polymers are relevant to the secondary structure of RNA, the large-scale branching of plectonemic DNA (and thus bacterial chromosomes), the conformations of single-ring polymers…

Soft Condensed Matter · Physics 2025-10-03 Elham Ghobadpour , Max Kolb , Ivan Junier , Ralf Everaers

It is well known that the mean field theory of directed polymers in a random medium exhibits replica symmetry breaking with a distribution of overlaps which consists of two delta functions. Here we show that the leading finite size…

Statistical Mechanics · Physics 2016-10-12 Bernard Derrida , Peter Mottishaw

We study the thermodynamic behavior of branched polymers. We first study random walks in order to clarify the thermodynamic relation between the canonical ensemble and the grand canonical ensemble. We then show that correlation functions…

High Energy Physics - Theory · Physics 2009-10-31 Hajime Aoki , Satoshi Iso , Hikaru Kawai , Yoshihisa Kitazawa

This article will review recent results on dimensional reduction for branched polymers, and discuss implications for critical phenomena. Parisi and Sourlas argued in 1981 that branched polymers fall into the universality class of the…

Mathematical Physics · Physics 2007-05-23 John Z. Imbrie

In [math-ph/0107005] we have proven that the generating function for self-avoiding branched polymers in D+2 continuum dimensions is proportional to the pressure of the hard-core continuum gas at negative activity in D dimensions. This…

Mathematical Physics · Physics 2016-09-07 David C. Brydges , John Z. Imbrie

We present a semi-analytical approach to the determination of the dynamic properties of randomly branched polymers under the Rouse approximation. The principle procedure is based on examining a spectrum of eigenvalues which represents the…

Statistical Mechanics · Physics 2009-10-31 Josh P. Kemp , Zheng Yu Chen

Two-dimensional monodisperse linear polymer chains are known to adopt for sufficiently large chain lengths $N$ and surface fractions $\phi$ compact configurations with fractal perimeters. We show here by means of Monte Carlo simulations of…

Soft Condensed Matter · Physics 2025-08-04 J. P. Wittmer , A. Cavallo , A. Johner

We analyze the universal conformational properties of complex copolymer macromolecules, based on two topologies: the rosette structure containing $f_c$ linear branches and $f_r$ closed loops grafted to the central core, and the symmetric…

Soft Condensed Matter · Physics 2024-04-02 K. Haydukivska , V. Blavatska
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