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Diffusive properties of interacting magnetic dipoles confined in a parabolic narrow channel and in the presence of a periodic modulated (corrugated) potential along the unconfined direction are studied using Brownian dynamics simulations.…

Soft Condensed Matter · Physics 2014-03-17 D. Lucena , J. E. Galván-Moya , W. P. Ferreira , F. M. Peeters

Biological, physical, medical, and numerical applications involving membrane problems on different scales are numerous. We propose an extension of the standard Turing theory to the case of two domains separated by a permeable membrane. To…

Analysis of PDEs · Mathematics 2022-03-04 Giorgia Ciavolella

An anomalous diffusion model for ion channel gating is put forward. This scheme is able to describe non-exponential, power-law like distributions of residence time intervals in several types of ion channels. Our method presents a…

Biological Physics · Physics 2007-05-23 Igor Goychuk , Peter Hanggi

We investigate the outflux of ions through the channels in a cell membrane. The channels undergo an open/close cycle according to a periodic schedule. Our study is based both on theoretical considerations relying on homogenization theory,…

Analysis of PDEs · Mathematics 2014-11-21 D. Andreucci , D. Bellaveglia , E. N. M. Cirillo

One-dimensional non-equilibrium models of particles subjected to a coagulation-diffusion process are important in understanding non-equilibrium dynamics, and fluctuation-dissipation relation. We consider in this paper transport properties…

Statistical Mechanics · Physics 2015-06-18 Jean-Yves Fortin

The diffusion model is used to calculate the time-averaged flow of particles in stochastic media and the propagation of waves averaged over ensembles of disordered static configurations. For classical waves exciting static disordered…

Disordered Systems and Neural Networks · Physics 2024-01-11 Azriel Z. Genack , Yiming Huang , Asher Maor , Zhou Shi

We consider a nonlinear drift-diffusion system for multiple charged species in a porous medium in 2D and 3D with periodic microstructure. The system consists of a transport equation for the concentration of the species and Poisson's…

Analysis of PDEs · Mathematics 2022-06-16 Apratim Bhattacharya , Markus Gahn , Maria Neuss-Radu

A cross-diffusion system describing ion transport through biological membranes or nanopores in a bounded domain with mixed Dirichlet-Neumann boundary conditions is analyzed. The ion concentrations solve strongly coupled diffusion equations…

Analysis of PDEs · Mathematics 2017-06-23 Anita Gerstenmayer , Ansgar Jüngel

The solution of the Poisson--Boltzmann equation for counterions confined between two charged plates is known analytically up to a constant, namely, the ion density in the middle of the channel. This quantity is relevant also because it…

Computational Physics · Physics 2018-09-06 Andrei Bazarenko , Marcello Sega

To simulate the transient enhanced diffusion near the surface or interface, a set of equations describing the impurity diffusion and quasichemical reactions of dopant atoms and point defects in ion-implanted layers is proposed and analyzed.…

Materials Science · Physics 2007-05-23 O. I. Velichko , Yu. P. Shaman , A. K. Fedotov , A. V. Masanik

Single-file transport refers to the motion of particles in a narrow channel, such that they cannot bypass each other. This constraint leads to strong correlations between the particles, described by correlation profiles, which measure the…

Statistical Mechanics · Physics 2024-02-09 Aurélien Grabsch , Théotim Berlioz , Pierre Rizkallah , Pierre Illien , Olivier Bénichou

A relation between the effective diffusion coefficient in a lattice with random site energies and random trasition rates and the macroscopic conductivity in a random resistor network allows for elucidating possible sources of anomalous…

Statistical Mechanics · Physics 2012-05-14 Federico Camboni , Igor M. Sokolov

Using analytical calculations and computer simulations we consider both the lateral diffusion of a membrane protein and the fluctuation spectrum of the membrane in which the protein is embedded. The membrane protein interacts with the…

Soft Condensed Matter · Physics 2015-05-18 Ellen Reister-Gottfried , Stefan M. Leitenberger , Udo Seifert

We give an explicit formula for the membrane potential of cells in terms of the intracellular and extracellular ionic concentrations, and derive equations for the ionic currents that flow through channels, exchangers and electrogenic pumps.…

Biological Physics · Physics 2007-05-23 L. P. Endresen , K. Hall , J. S. Hoye , J. Myrheim

This paper studies mechanism of preconcentration of charged particles in a straight micro-channel embedded with permselective membranes, by numerically solving coupled transport equations of ions, charged particles and solvent fluid without…

Fluid Dynamics · Physics 2018-02-14 Zirui Li , Wei Liu , Yudan Zhu , Xiaohua Lu , Yuantong Gu , Jongyoon Han

Diffusion of chemicals or tracer molecules through complex systems containing irregularly shaped channels is important in many applications. Most theoretical studies based on the famed Fick-Jacobs equation focus on the idealised case of…

Statistical Mechanics · Physics 2014-12-24 Max Bauer , Aljaz Godec , Ralf Metzler

We study a lattice model for the spreading of fluid films, which are a few molecular layers thick, in narrow channels with inert lateral walls. We focus on systems connected to two particle reservoirs at different chemical potentials,…

Statistical Mechanics · Physics 2009-11-13 C. Dotti , A. Gambassi , M. N. Popescu , S. Dietrich

We study two actions of a stochastic flow $\varphi_t$ on the space of $0-$currents $T$ of a differentiable manifold $M$. In particular, we give conditions on a current $T$ to be invariant under these actions. Also, we apply our results to…

Dynamical Systems · Mathematics 2016-02-08 Diego Sebastian Ledesma , Fabiano Borges da Silva

Periodic configurations of electrodes, in particular of microelectrodes, have been of interest since the advent of microfabrication. In this report, theory which is common to any periodic cell (or any cell that can be extended periodically)…

Chemical Physics · Physics 2018-02-13 Cristian F. Guajardo Yévenes , Werasak Surareungchai

Hypothesis:Diffusion in confinement is an important fundamental problem with significant implications for applications of supported liquid phases. However, resolving the spatially dependent diffusion coefficient, parallel and perpendicular…