English
Related papers

Related papers: Extinction scenarios in evolutionary processes: A …

200 papers

Methods for predicting the probability and timing of a species' extinction are typically based on a combination of theoretical models and empirical data, and focus on single species population dynamics. Of course, species also interact with…

Populations and Evolution · Quantitative Biology 2012-06-11 Gian Marco Palamara , Gustav W. Delius , Matthew J. Smith , Owen L. Petchey

Near the beginning of the century, Wright and Fisher devised an elegant, mathematically tractable model of gene reproduction and replacement that laid the foundation for contemporary population genetics. The Wright-Fisher model and its…

Probability · Mathematics 2013-12-23 Todd L. Parsons

We study a model of growing population that competes for resources. At each time step, all existing particles reproduce and the offspring randomly move to neighboring sites. Then at any site with more than one offspring, the particles are…

Probability · Mathematics 2015-10-26 Idan Perl , Arnab Sen , Ariel Yadin

Under the effect of strong genetic drift, it is highly probable to observe gene fixation or gene loss in a population, shown by infinite peaks on a coherently constructed potential energy landscape. It is then important to ask what such…

Populations and Evolution · Quantitative Biology 2015-06-15 Song Xu , Shuyun Jiao , Pengyao Jiang , Ping Ao

The Verhulst model is probably the best known macroscopic rate equation in population ecology. It depends on two parameters, the intrinsic growth rate and the carrying capacity. These parameters can be estimated for different populations…

Populations and Evolution · Quantitative Biology 2015-06-19 Vicenç Méndez , Michael Assaf , Daniel Campos , Werner Horsthemke

We consider a stochastic population model where the intrinsic or demographic noise causes cycling between states before the population eventually goes extinct. A master equation approach coupled with a WKB (Wentzel-Kramers-Brillouin)…

Populations and Evolution · Quantitative Biology 2014-12-16 Garrett Nieddu , Lora Billings , Eric Forgoston

We study the behavior of an infinite system of ordinary differential equations modeling the dynamics of a metapopulation, a set of (discrete) populations subject to local catastrophes and connected via migration under a mean field rule; the…

Probability · Mathematics 2007-05-23 A. D. Barbour , A. Pugliese

We study stochastic extinction for a class of Markov processes motivated by models in ecology and epidemiology. Extinction is often characterized by a boundedness condition and a condition on boundary Lyapunov exponents (invasion rates).…

Probability · Mathematics 2026-04-23 Nhu Nguyen , Dang H. Nguyen

The dynamics of species' densities depend both on internal and external variables. Internal variables include frequencies of individuals exhibiting different phenotypes or living in different spatial locations. External variables include…

Populations and Evolution · Quantitative Biology 2019-03-28 Michel Benaïm , Sebastian J. Schreiber

We study the stochastic evolution of four species in cyclic competition in a well mixed environment. In systems composed of a finite number $N$ of particles these simple interaction rules result in a rich variety of extinction scenarios,…

Statistical Mechanics · Physics 2012-07-09 C. H. Durney , S. O. Case , M. Pleimling , R. K. P. Zia

We consider a stochastic logistic growth model involving both birth and death rates in the drift and diffusion coefficients for which extinction eventually occurs almost surely. The associated complete Fokker-Planck equation describing the…

Statistics Theory · Mathematics 2013-07-09 Fabien Campillo , Marc Joannides , Irène Larramendy-Valverde

The Wright-Fisher model is the most popular population model for describing the behaviour of evolutionary systems with a finite population size. Approximations to the model have commonly been used for the analysis of time-resolved genome…

Populations and Evolution · Quantitative Biology 2016-11-21 Nuno R. Nené , Ville Mustonen , Christopher J. R. Illingworth

Introducing the effect of extinction into the so-called replicator equations in mathematical biology, we construct a general model of ecosystems. The present model shows mass extinction by its own extinction dynamics when the system…

adap-org · Physics 2008-02-03 Kei Tokita , Ayumu Yasutomi

In large but finite populations, weak demographic stochasticity due to random birth and death events can lead to population extinction. The process is analogous to the escaping problem of trapped particles under random forces. Methods…

Populations and Evolution · Quantitative Biology 2018-11-28 Xiaoquan Yu , Xiang-Yi Li

Let $Z = (Z_t)_{t\in[0,\infty)}$ be an ergodic Markov process and, for every $n\in\mathbb{N}$, let $Z^n = (Z_{n^2 t})_{t\in[0,\infty)}$ drive a process $X^n$. Classical results show under suitable conditions that the sequence of…

Probability · Mathematics 2018-03-06 Martin Hutzenthaler , Peter Pfaffelhuber , Clemens Printz

The statistical properties of an ecosystem composed of species interacting via pairwise, random interactions and deterministic, concentration limiting self-interaction are studied analytically with tools of equilibrium statistical mechanics…

Disordered Systems and Neural Networks · Physics 2009-11-07 Viviane M. de Oliveira , J. F. Fontanari

A deterministic two-species predator-prey model with prey herd behavior is considered incorporating mutual interference and the effect of fear. We provide guidelines to the dynamical analysis of biologically feasible equilibrium points. We…

Dynamical Systems · Mathematics 2022-12-20 Kwadwo Antwi-Fordjour , Rana D. Parshad , Hannah E. Thompson , Stephanie B. Westaway

Many mathematical frameworks of evolutionary game dynamics assume that the total population size is constant and that selection affects only the relative frequency of strategies. Here, we consider evolutionary game dynamics in an extended…

Populations and Evolution · Quantitative Biology 2018-02-16 Alex McAvoy , Nicolas Fraiman , Christoph Hauert , John Wakeley , Martin A. Nowak

The survival of natural populations may be greatly affected by environmental conditions that vary in space and time. We look at a population residing in two locations (patches) coupled by migration, in which the local conditions fluctuate…

Statistical Mechanics · Physics 2021-08-11 Tal Agranov , Guy Bunin

Extinction times in resampling processes are fundamental yet often intractable, as previous formulas scale as $2^M$ with the number of states $M$ present in the initial probability distribution. We solve this by treating multinomial updates…

Machine Learning · Statistics 2025-09-25 Matteo Benati , Alessandro Londei , Denise Lanzieri , Vittorio Loreto