Related papers: Faster parameterized algorithm for Bicluter Editin…
The editing of a combinatorial object is the alteration of some of its elements such that the resulting object satisfies a certain fixed property. The edit problem for graphs, when the edges are added or deleted, was first studied…
In the $k$-Edit Circular Pattern Matching ($k$-Edit CPM) problem, we are given a length-$n$ text $T$, a length-$m$ pattern $P$, and a positive integer threshold $k$, and we are to report all starting positions of the substrings of $T$ that…
The $k$-cut problem asks, given a connected graph $G$ and a positive integer $k$, to find a minimum-weight set of edges whose removal splits $G$ into $k$ connected components. We give the first polynomial-time algorithm with approximation…
We give algorithms with running time $2^{O({\sqrt{k}\log{k}})} \cdot n^{O(1)}$ for the following problems. Given an $n$-vertex unit disk graph $G$ and an integer $k$, decide whether $G$ contains (1) a path on exactly/at least $k$ vertices,…
Graphs with high symmetry or regularity are the main source for experimentally hard instances of the notoriously difficult graph isomorphism problem. In this paper, we study the computational complexity of isomorphism testing for line…
Cutwidth is one of the classic layout parameters for graphs. It measures how well one can order the vertices of a graph in a linear manner, so that the maximum number of edges between any prefix and its complement suffix is minimized. As…
Suppose that we have two parties that possess each a binary string. Suppose that the length of the first string (document) is $n$ and that the two strings (documents) have edit distance (minimal number of deletes, inserts and substitutions…
Given a graph $G$ and a parameter $k$, the $k$-biclique problem asks whether $G$ contains a complete bipartite subgraph $K_{k,k}$. This is the most easily stated problem on graphs whose parameterized complexity is still unknown. We provide…
In the reordering buffer problem (RBP), a server is asked to process a sequence of requests lying in a metric space. To process a request the server must move to the corresponding point in the metric. The requests can be processed slightly…
An induced subgraph is called an induced matching if each vertex is a degree-1 vertex in the subgraph. The \textsc{Almost Induced Matching} problem asks whether we can delete at most $k$ vertices from the input graph such that the remaining…
We consider the maintenance of maximal bicliques from a dynamic bipartite graph that changes over time due to the addition or deletion of edges. When the set of edges in a graph changes, we are interested in knowing the change in the set of…
We give a $O^*(k^{O(k)})$ time isomorphism testing algorithm for graphs of eigenvalue multiplicity bounded by $k$ which improves on the previous best running time bound of $O^*(2^{O(k^2/\log k)})$.
The Minimum Fill-in problem is to decide if a graph can be triangulated by adding at most k edges. Kaplan, Shamir, and Tarjan [FOCS 1994] have shown that the problem is solvable in time O(2^(O(k)) + k2 * nm) on graphs with n vertices and m…
\textsc{Densest $k$-Subgraph} is the problem to find a vertex subset $S$ of size $k$ such that the number of edges in the subgraph induced by $S$ is maximized. In this paper, we show that \textsc{Densest $k$-Subgraph} is fixed parameter…
We developed a flexible parallel algorithm for graph summarization based on vertex-centric programming and parameterized message passing. The base algorithm supports infinitely many structural graph summary models defined in a formal…
Biclustering is the task of simultaneously clustering the rows and columns of the data matrix into different subgroups such that the rows and columns within a subgroup exhibit similar patterns. In this paper, we consider the case of…
We consider the Minimum Steiner Cut problem on undirected planar graphs with non-negative edge weights. This problem involves finding the minimum cut of the graph that separates a specified subset $X$ of vertices (terminals) into two parts.…
Vertex splitting is a graph modification operation in which a vertex is replaced by multiple vertices such that the union of their neighborhoods equals the neighborhood of the original vertex. We introduce and study vertex splitting as a…
Enumerating maximal $k$-biplexes (MBPs) of a bipartite graph has been used for applications such as fraud detection. Nevertheless, there usually exists an exponential number of MBPs, which brings up two issues when enumerating MBPs, namely…
The k-CO-PATH SET problem asks, given a graph G and a positive integer k, whether one can delete k edges from G so that the remainder is a collection of disjoint paths. We give a linear-time fpt algorithm with complexity O^*(1.588^k) for…