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Advanced algorithms for large-scale electronic structure calculations are mostly based on processing multi-dimensional sparse data. Examples are sparse matrix-matrix multiplications in linear-scaling Kohn-Sham calculations or the efficient…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-10-31 Ilia Sivkov , Patrick Seewald , Alfio Lazzaro , Juerg Hutter

Multiplication of two sparse matrices is a key operation in the simulation of the electronic structure of systems containing thousands of atoms and electrons. The highly optimized sparse linear algebra library DBCSR (Distributed Block…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-13 Iain Bethune , Andeas Gloess , Juerg Hutter , Alfio Lazzaro , Hans Pabst , Fiona Reid

Scientific workloads have traditionally exploited high levels of sparsity to accelerate computation and reduce memory requirements. While deep neural networks can be made sparse, achieving practical speedups on GPUs is difficult because…

Machine Learning · Computer Science 2020-09-02 Trevor Gale , Matei Zaharia , Cliff Young , Erich Elsen

We implement two novel algorithms for sparse-matrix dense-matrix multiplication (SpMM) on the GPU. Our algorithms expect the sparse input in the popular compressed-sparse-row (CSR) format and thus do not require expensive format conversion.…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-06-13 Carl Yang , Aydin Buluc , John D. Owens

Sparse linear algebra kernels play a critical role in numerous applications, covering from exascale scientific simulation to large-scale data analytics. Offloading linear algebra kernels on one GPU will no longer be viable in these…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-19 Jieyang Chen , Chenhao Xie , Jesun S Firoz , Jiajia Li , Shuaiwen Leon Song , Kevin Barker , Mark Raugas , Ang Li

Sparse Matrix-Matrix multiplication is a key kernel that has applications in several domains such as scientific computing and graph analysis. Several algorithms have been studied in the past for this foundational kernel. In this paper, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-01-10 Mehmet Deveci , Christian Trott , Sivasankaran Rajamanickam

KBLAS is a new open source high performance library that provides optimized kernels for a subset of Level 2 BLAS functionalities on CUDA-enabled GPUs. Since performance of dense matrix-vector multiplication is hindered by the overhead of…

Mathematical Software · Computer Science 2014-10-08 Ahmad Abdelfattah , David Keyes , Hatem Ltaief

Sparse-dense linear algebra is crucial in many domains, but challenging to handle efficiently on CPUs, GPUs, and accelerators alike; multiplications with sparse formats like CSR and CSF require indirect memory lookups. In this work, we…

Hardware Architecture · Computer Science 2020-12-15 Paul Scheffler , Florian Zaruba , Fabian Schuiki , Torsten Hoefler , Luca Benini

Achieving high efficiency with numerical kernels for sparse matrices is of utmost importance, since they are part of many simulation codes and tend to use most of the available compute time and resources. In addition, especially in large…

Performance · Computer Science 2013-05-07 Tobias Scharpff , Klaus Iglberger , Georg Hager , Ulrich Ruede

Tensor accelerators have gained popularity because they provide a cheap and efficient solution for speeding up computational-expensive tasks in Deep Learning and, more recently, in other Scientific Computing applications. However, since…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-15 Paolo Sylos Labini , Massimo Bernaschi , Francesco Silvestri , Flavio Vella

Matrix-matrix multiplication is a basic operation in linear algebra and an essential building block for a wide range of algorithms in various scientific fields. Theory and implementation for the dense, square matrix case are well-developed.…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-06-01 Alfio Lazzaro , Joost VandeVondele , Juerg Hutter , Ole Schuett

Scaling up the sparse matrix-vector multiplication kernel on modern Graphics Processing Units (GPU) has been at the heart of numerous studies in both academia and industry. In this article we present a novel non-parametric, self-tunable,…

Numerical Analysis · Computer Science 2012-12-24 Xintian Yang , Srinivasan Parthasarathy , Ponnuswamy Sadayappan

Sparse general matrix-matrix multiplication (spGEMM) is an essential component in many scientific and data analytics applications. However, the sparsity pattern of the input matrices and the interaction of their patterns make spGEMM…

Mathematical Software · Computer Science 2020-10-01 Orestis Zachariadis , Nitin Satpute , Juan Gómez-Luna , Joaquín Olivares

We have repurposed Google Tensor Processing Units (TPUs), application-specific chips developed for machine learning, into large-scale dense linear algebra supercomputers. The TPUs' fast inter-core interconnects (ICI)s, physically…

Computational Physics · Physics 2022-09-14 Adam G. M. Lewis , Jackson Beall , Martin Ganahl , Markus Hauru , Shrestha Basu Mallick , Guifre Vidal

We propose different implementations of the sparse matrix--dense vector multiplication (\spmv{}) for finite fields and rings $\Zb/m\Zb$. We take advantage of graphic card processors (GPU) and multi-core architectures. Our aim is to improve…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-09-09 Brice Boyer , Jean-Guillaume Dumas , Pascal Giorgi

Sparse data structures are commonly used in neural networks to reduce the memory footprint. These data structures are compact but cause irregularities such as random memory accesses, which prevent efficient use of the memory hierarchy. GPUs…

Programming Languages · Computer Science 2025-06-19 Hossein Albakri , Kazem Cheshmi

The Density Matrix Renormalization Group (DMRG) algorithm is a powerful tool for solving eigenvalue problems to model quantum systems. DMRG relies on tensor contractions and dense linear algebra to compute properties of condensed matter…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-26 Ryan Levy , Edgar Solomonik , Bryan K. Clark

We present a distributed-memory library for computations with dense structured matrices. A matrix is considered structured if its off-diagonal blocks can be approximated by a rank-deficient matrix with low numerical rank. Here, we use…

Mathematical Software · Computer Science 2015-06-29 François-Henry Rouet , Xiaoye S. Li , Pieter Ghysels , Artem Napov

Multiplication of a sparse matrix with another (dense or sparse) matrix is a fundamental operation that captures the computational patterns of many data science applications, including but not limited to graph algorithms, sparsely connected…

Numerical Analysis · Mathematics 2025-08-07 Aydın Buluç

Reducing the memory footprint of neural networks is a crucial prerequisite for deploying them in small and low-cost embedded devices. Network parameters can often be reduced significantly through pruning. We discuss how to best represent…

Data Structures and Algorithms · Computer Science 2021-11-25 Elias Trommer , Bernd Waschneck , Akash Kumar
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