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Networks represent relationships between entities in many complex systems, spanning from online social interactions to biological cell development and brain connectivity. In many cases, relationships between entities are unambiguously…

Social and Information Networks · Computer Science 2018-01-23 Ivan Brugere , Brian Gallagher , Tanya Y. Berger-Wolf

Neuroscience has recently made much progress, expanding the complexity of both neural-activity measurements and brain-computational models. However, we lack robust methods for connecting theory and experiment by evaluating our new big…

Quantitative Methods · Quantitative Biology 2023-07-06 Heiko H. Schütt , Alexander D. Kipnis , Jörn Diedrichsen , Nikolaus Kriegeskorte

Several network growth models have been proposed in the literature that attempt to incorporate properties of citation networks. Generally, these models aim at retaining the degree distribution observed in real-world networks. In this work,…

Social and Information Networks · Computer Science 2020-02-19 Dattatreya Mohapatra , Siddharth Pal , Soham De , Ponnurangam Kumaraguru , Tanmoy Chakraborty

The structure of networks that provide optimal transport properties has been investigated in a variety of contexts. While many different formulations of this problem have been considered, it is recurrently found that optimal networks are…

Biological Physics · Physics 2015-05-13 Francis Corson

Several real-world and abstract structures and systems are characterized by marked hierarchy to the point of being expressed as trees. Because the study of these entities often involves sampling (or discovering) the tree nodes in a specific…

Physics and Society · Physics 2022-04-18 Alexandre Benatti , Luciano da F. Costa

Given i.i.d. data from an unknown distribution, we consider the problem of predicting future items. An adaptive way to estimate the probability density is to recursively subdivide the domain to an appropriate data-dependent granularity. A…

Probability · Mathematics 2009-12-30 Marcus Hutter

When choosing a suitable technique for regression and classification with multivariate predictor variables, one is often faced with a tradeoff between interpretability and high predictive accuracy. To give a classical example,…

Machine Learning · Statistics 2011-01-10 Nicolai Meinshausen

This paper presents a new approach for trees-based regression, such as simple regression tree, random forest and gradient boosting, in settings involving correlated data. We show the problems that arise when implementing standard…

Methodology · Statistics 2021-08-09 Assaf Rabinowicz , Saharon Rosset

We investigate the statistics of trees grown from some initial tree by attaching links to preexisting vertices, with attachment probabilities depending only on the valence of these vertices. We consider the asymptotic mass distribution that…

Statistical Mechanics · Physics 2007-05-23 François David , Philippe Di Francesco , Emmanuel Guitter , Thordur Jonsson

The main goal of this paper is to describe a new pruning method for solving decision trees and game trees. The pruning method for decision trees suggests a slight variant of decision trees that we call scenario trees. In scenario trees, we…

Artificial Intelligence · Computer Science 2013-02-21 Prakash P. Shenoy

Cascade models are central to understanding, predicting, and controlling epidemic spreading and information propagation. Related optimization, including influence maximization, model parameter inference, or the development of vaccination…

Artificial Intelligence · Computer Science 2020-12-17 Rebekka Burkholz , John Quackenbush

Processes on networks consist of two interdependent parts: the network topology, consisting of the links between nodes, and the dynamics, specified by some governing equations. This work considers the prediction of the future dynamics on an…

Physics and Society · Physics 2022-11-08 Bastian Prasse , Piet Van Mieghem

We provide a fundamental result for bucket increasing trees, which gives a complete characterization of all families of bucket increasing trees that can be generated by a tree evolution process. We also provide several equivalent…

Combinatorics · Mathematics 2022-06-14 Markus Kuba , Alois Panholzer

Given i.i.d. data from an unknown distribution, we consider the problem of predicting future items. An adaptive way to estimate the probability density is to recursively subdivide the domain to an appropriate data-dependent granularity. A…

Statistics Theory · Mathematics 2007-06-13 Marcus Hutter

There has been considerable recent interest in the properties of networks, such as citation networks and the worldwide web, that grow by the addition of vertices, and a number of simple solvable models of network growth have been studied.…

Statistical Mechanics · Physics 2011-11-09 Cristopher Moore , Gourab Ghoshal , M. E. J. Newman

We investigate how the properties of epidemic networks change depending on the availability of different types of data on a disease outbreak. This is achieved by introducing mathematical and computational methods that estimate the…

Computational Physics · Physics 2025-09-03 Oscar Fajardo-Fontiveros , Carl J. E. Suster , Eduardo G. Altmann

In this paper, we propose DeepTree, a novel method for modeling trees based on learning developmental rules for branching structures instead of manually defining them. We call our deep neural model situated latent because its behavior is…

Machine Learning · Computer Science 2023-05-10 Xiaochen Zhou , Bosheng Li , Bedrich Benes , Songlin Fei , Sören Pirk

Decision trees built with data remain in widespread use for nonparametric prediction. Predicting probability distributions is preferred over point predictions when uncertainty plays a prominent role in analysis and decision-making. We study…

Methodology · Statistics 2024-06-21 Sara Shashaani , Ozge Surer , Matthew Plumlee , Seth Guikema

The computation of feedback control using Dynamic Programming equation is a difficult task due the curse of dimensionality. The tree structure algorithm is one the methods introduced recently that mitigate this problem. The method computes…

Numerical Analysis · Mathematics 2022-10-06 Alessandro Alla , Luca Saluzzi

Consensus methods are widely used for combining phylogenetic trees into a single estimate of the evolutionary tree for a group of species. As more taxa are added, the new source trees may begin to tell a different evolutionary story when…

Populations and Evolution · Quantitative Biology 2017-01-27 David Bryant , Andrew Francis , Mike Steel