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Inferring network topology from dynamical observations is a fundamental problem pervading research on complex systems. Here, we present a simple, direct method to infer the structural connection topology of a network, given an observation…

Chaotic Dynamics · Physics 2015-05-19 Srinivas Gorur Shandilya , Marc Timme

Synchronization processes are ubiquitous despite the many connectivity patterns that complex systems can show. Usually, the emergence of synchrony is a macroscopic observable, however, the microscopic details of the system, as e.g. the…

Physics and Society · Physics 2018-06-08 Lluis Arola-Fernandez , Albert Diaz-Guilera , Alex Arenas

We study the problem of estimating the origin of an epidemic outbreak -- given a contact network and a snapshot of epidemic spread at a certain time, determine the infection source. Finding the source is important in different contexts of…

Physics and Society · Physics 2014-11-20 Andrey Y. Lokhov , Marc Mézard , Hiroki Ohta , Lenka Zdeborová

The exploration of epidemic dynamics on dynamically evolving ("adaptive") networks poses nontrivial challenges to the modeler, such as the determination of a small number of informative statistics of the detailed network state (that is, a…

Quantitative Methods · Quantitative Biology 2015-07-07 Assimakis A. Kattis , Alexander Holiday , Ana-Andreea Stoica , Ioannis G. Kevrekidis

A major achievement in the study of complex networks is the observation that diverse systems, from sub-cellular biology to social networks, exhibit universal topological characteristics. Yet this universality does not naturally translate to…

Physics and Society · Physics 2018-01-29 Chittaranjan Hens , Uzi Harush , Reuven Cohen , Baruch Barzel

We introduce an analytical approach that allows predictions and mechanistic insights into the dynamics of nonlinear oscillator networks with heterogeneous time delays. We demonstrate that time delays shape the spectrum of a matrix…

Differential equations are a ubiquitous tool to study dynamics, ranging from physical systems to complex systems, where a large number of agents interact through a graph with non-trivial topological features. Data-driven approximations of…

Statistical Mechanics · Physics 2024-04-26 Vaiva Vasiliauskaite , Nino Antulov-Fantulin

This article presents a theoretical investigation of computation beyond the Turing barrier from emergent behavior in distributed systems. In particular, we present an algorithmic network that is a mathematical model of a networked…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-10-08 Felipe S. Abrahão , Ítala M. Loffredo D'Ottaviano , Klaus Wehmuth , Francisco Antônio Dória , Artur Ziviani

Recently, there has been significant advancement in the machine learning (ML) approach and its application to diverse systems ranging from complex to quantum systems. As one of such systems, a coupled-oscillators system exhibits intriguing…

Statistical Mechanics · Physics 2021-09-21 Je Ung Song , K. Choi , B. Kahng

Capturing the structured mixing within a population is key to the reliable projection of infectious disease dynamics and hence informed control. Both heterogeneity in the number of contacts and age-structured mixing have been repeatedly…

Social and Information Networks · Computer Science 2026-03-17 Luke Murray Kearney , Emma L Davis , Matt J Keeling

Networks are landmarks of many complex phenomena where interweaving interactions between different agents transform simple local rule-sets into nonlinear emergent behaviors. While some recent studies unveil associations between the network…

Social and Information Networks · Computer Science 2021-08-05 Ali Tavasoli , Teague Henry , Heman Shakeri

Synchronization is crucial for the correct functionality of many natural and man-made complex systems. In this work we characterize the formation of synchronization patterns in networks of Kuramoto oscillators. Specifically, we reveal…

Optimization and Control · Mathematics 2017-09-20 Lorenzo Tiberi , Chiara Favaretto , Mario Innocenti , Danielle S. Bassett , Fabio Pasqualetti

Neural network based machine learning is emerging as a powerful tool for obtaining phase diagrams when traditional regression schemes using local equilibrium order parameters are not available, as in many-body localized or topological…

Disordered Systems and Neural Networks · Physics 2018-06-27 Jordan Venderley , Vedika Khemani , Eun-Ah Kim

Clinical data from electronic medical records, registries or trials provide a large source of information to apply machine learning methods in order to foster precision medicine, e.g. by finding new disease phenotypes or performing…

Machine Learning · Computer Science 2020-08-17 Maria Hügle , Gabriel Kalweit , Thomas Huegle , Joschka Boedecker

Not all nodes in a network are created equal. Differences and similarities exist at both individual node and group levels. Disentangling single node from group properties is crucial for network modeling and structural inference. Based on…

Statistical Mechanics · Physics 2015-05-20 Joerg Reichardt , Roberto Alamino , David Saad

We explore a simple mathematical model of network computation, based on Markov chains. Similar models apply to a broad range of computational phenomena, arising in networks of computers, as well as in genetic, and neural nets, in social…

Information Retrieval · Computer Science 2009-04-18 Dusko Pavlovic

Disease awareness in infection dynamics can be modeled with adaptive contact networks whose rewiring rules reflect the attempt by susceptibles to avoid infectious contacts. Simulations of this type of models show an active phase with…

Adaptation and Self-Organizing Systems · Physics 2012-12-06 Stefan Wieland , Tomas Aquino , Ana Nunes

Due to the complexity of the human body, most diseases present a high inter-personal variability in the way they manifest, i.e. in their phenotype, which has important clinical repercussions - as for instance the difficulty in defining…

Physics and Society · Physics 2018-06-06 Massimiliano Zanin , Juan Manuel Tuñas , Ernestina Menasalvas

Designing high-performing networks requires optimizing for functionality while respecting physical, geometric, or budget constraints. Yet, mathematical and computational tools to design such systems remain limited, particularly for…

Adaptation and Self-Organizing Systems · Physics 2026-05-14 Guram Mikaberidze , Dane Taylor

Empirical data on real complex systems are becoming increasingly available. Parallel to this is the need for new methods of reconstructing (inferring) the topology of networks from time-resolved observations of their node-dynamics. The…

Dynamical Systems · Mathematics 2019-09-16 Marc G. Leguia , Zoran Levnajic , Ljupco Todorovski , Bernard Zenko