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Transfer entropy, an information-theoretic measure of time-directed information transfer between joint processes, has steadily gained popularity in the analysis of complex stochastic dynamics in diverse fields, including the neurosciences,…

Applications · Statistics 2015-06-05 Lionel Barnett , Terry Bossomaier

Mechanistic interpretability aims to break models into meaningful parts; verifying that two such parts implement the same computation is a prerequisite. Existing similarity measures evaluate either empirical behaviour, leaving them blind to…

Machine Learning · Computer Science 2026-05-15 ML Nissen Gonzalez , Melwina Albuquerque , Laurence Wroe , Jacob Meyer Cohen , Logan Riggs Smith , Thomas Dooms

Transient phenomena play a key role in coordinating brain activity at multiple scales, however,their underlying mechanisms remain largely unknown. A key challenge for neural data science is thus to characterize the network interactions at…

Neurons and Cognition · Quantitative Biology 2022-09-16 Kaidi Shao , Nikos K. Logothetis , Michel Besserve

In this article we introduce an entropy-based, scale-dependent centrality that is evaluated as the Shannon entropy of the distribution at time t of a continuous-time random walk. It ranks nodes as a function of the time t, which acts as a…

Statistical Mechanics · Physics 2021-08-23 L. R. Schwengber , S. D. Prado , S. R. Dahmen

This paper considers a sequential estimation and sensor scheduling problem with one sensor and one estimator. The sensor makes sequential observations about the state of an underlying memoryless stochastic process, and makes a decision as…

Systems and Control · Computer Science 2016-11-17 Xiaobin Gao , Emrah Akyol , Tamer Basar

The ability to distinguish between correlation and causation of variables in molecular systems remains an interesting and open area of investigation. In this work, we probe causality in a molecular system using two independent computational…

Chemical Physics · Physics 2025-02-27 Vittorio Del Tatto , Debarshi Banerjee , Ali Hassanali , Alessandro Laio

The problems of causality, modeling, and control for chaotic, high-dimensional dynamical systems are formulated in the language of information theory. The central quantity of interest is the Shannon entropy, which measures the amount of…

Dynamical Systems · Mathematics 2022-06-01 Adrián Lozano-Durán , Gonzalo Arranz

Entropic causal inference is a recent framework for learning the causal graph between two variables from observational data by finding the information-theoretically simplest structural explanation of the data, i.e., the model with smallest…

Machine Learning · Computer Science 2025-09-23 Spencer Compton , Kristjan Greenewald , Dmitriy Katz , Murat Kocaoglu

Explaining underlying causes or effects about events is a challenging but valuable task. We define a novel problem of generating explanations of a time series event by (1) searching cause and effect relationships of the time series with…

Computation and Language · Computer Science 2018-04-26 Dongyeop Kang , Varun Gangal , Ang Lu , Zheng Chen , Eduard Hovy

Complex dynamical systems are prevalent in many scientific disciplines. In the analysis of such systems two aspects are of particular interest: 1) the temporal patterns along which they evolve and 2) the underlying causal mechanisms.…

Methodology · Statistics 2022-05-31 Nicolas-Domenic Reiter , Andreas Gerhardus , Jakob Runge

Quantum theory allows the traversing of multiple channels in a superposition of different orders. When the order in which the channels are traversed is controlled by an auxiliary quantum system, various unknown parameters of the channels…

Quantum Physics · Physics 2023-09-27 A. Z. Goldberg , L. L. Sanchez-Soto , K. Heshami

A central question for causal inference is to decide whether a set of correlations fit a given causal structure. In general, this decision problem is computationally infeasible and hence several approaches have emerged that look for…

Quantum Physics · Physics 2018-07-26 Mirjam Weilenmann , Roger Colbeck

A general theory for computing information transfers in nonlinear stochastic systems driven by deterministic forcing and additive and/or multiplicative noises, is presented. It extends the Liang-Kleeman framework of causality inference to…

Chaotic Dynamics · Physics 2023-10-12 Carlos A. Pires , David Docquier , Stéphane Vannitsem

We deal here with the issue of determinism versus randomness in time series. One wishes to identify their relative weights in a given time series. Two different tools have been advanced in the literature to such effect, namely, i) the…

We provide a simple and realistic model to study memory effects in a lossy bosonic quantum channel over arbitrary number of uses. The noise correlation among different uses is introduced by contiguous modes interactions which results in an…

Quantum Physics · Physics 2009-11-13 O. V. Pilyavets , V. G. Zborovskii , S. Mancini

Given two time series, can one tell, in a rigorous and quantitative way, the cause and effect between them? Based on a recently rigorized physical notion namely information flow, we arrive at a concise formula and give this challenging…

Methodology · Statistics 2014-03-27 X. San Liang

Causal discovery aims to recover information about an unobserved causal graph from the observable data it generates. Layerings are orderings of the variables which place causes before effects. In this paper, we provide ways to recover…

Inferring causal relations from time series measurements is an ill-posed mathematical problem, where typically an infinite number of potential solutions can reproduce the given data. We explore in depth a strategy to disambiguate between…

Dynamical Systems · Mathematics 2020-11-04 George Stepaniants , Bingni W. Brunton , J. Nathan Kutz

The abundance of data produced daily from large variety of sources has boosted the need of novel approaches on causal inference analysis from observational data. Observational data often contain noisy or missing entries. Moreover, causal…

Methodology · Statistics 2017-03-14 Fani Tsapeli , Peter Tino , Mirco Musolesi

We present a general model for quantum channels with memory, and show that it is sufficiently general to encompass all causal automata: any quantum process in which outputs up to some time t do not depend on inputs at times t' > t can be…

Quantum Physics · Physics 2009-11-11 Dennis Kretschmann , Reinhard F. Werner
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