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Graph comparison deals with identifying similarities and dissimilarities between graphs. A major obstacle is the unknown alignment of graphs, as well as the lack of accurate and inexpensive comparison metrics. In this work we introduce the…

Machine Learning · Computer Science 2021-12-09 Hermina Petric Maretic , Mireille El Gheche , Giovanni Chierchia , Pascal Frossard

Optimal transportation distances are valuable for comparing and analyzing probability distributions, but larger-scale computational techniques for the theoretically favorable quadratic case are limited to smooth domains or regularized…

Other Computer Science · Computer Science 2016-03-23 Justin Solomon , Raif Rustamov , Leonidas Guibas , Adrian Butscher

Distance plays a fundamental role in measuring similarity between objects. Various visualization techniques and learning tasks in statistics and machine learning such as shape matching, classification, dimension reduction and clustering…

Machine Learning · Statistics 2025-04-23 Dianbin Bao , Kisung You , Lizhen Lin

We present a novel framework based on optimal transport for the challenging problem of comparing graphs. Specifically, we exploit the probabilistic distribution of smooth graph signals defined with respect to the graph topology. This allows…

Machine Learning · Computer Science 2019-12-09 Hermina Petric Maretic , Mireille EL Gheche , Giovanni Chierchia , Pascal Frossard

In graph signal processing, data samples are associated to vertices on a graph, while edge weights represent similarities between those samples. We propose a convex optimization problem to learn sparse well connected graphs from data. We…

Signal Processing · Electrical Eng. & Systems 2020-04-21 Eduardo Pavez , Antonio Ortega

In large networks, using the length of shortest paths as the distance measure has shortcomings. A well-studied shortcoming is that extending it to disconnected graphs and directed graphs is controversial. The second shortcoming is that a…

Data Structures and Algorithms · Computer Science 2018-04-03 Mostafa Haghir Chehreghani , Albert Bifet , Talel Abdessalem

Metric graphs are ubiquitous in science and engineering. For example, many data are drawn from hidden spaces that are graph-like, such as the cosmic web. A metric graph offers one of the simplest yet still meaningful ways to represent the…

Computational Geometry · Computer Science 2017-12-05 Tamal K. Dey , Dayu Shi , Yusu Wang

Graphs are used in almost every scientific discipline to express relations among a set of objects. Algorithms that compare graphs, and output a closeness score, or a correspondence among their nodes, are thus extremely important. Despite…

Discrete Mathematics · Computer Science 2020-11-17 Sam Safavi , José Bento

Resistance distance has been studied extensively in the past years, with the majority of previous studies devoted to undirected networks, in spite of the fact that various realistic networks are directed. Although several generalizations of…

Networking and Internet Architecture · Computer Science 2023-02-09 Mingzhe Zhu , Liwang Zhu , Huan Li , Wei Li , Zhongzhi Zhang

We propose a novel method for comparing non-aligned graphs of different sizes, based on the Wasserstein distance between graph signal distributions induced by the respective graph Laplacian matrices. Specifically, we cast a new formulation…

Machine Learning · Computer Science 2020-03-16 Hermina Petric Maretic , Mireille El Gheche , Matthias Minder , Giovanni Chierchia , Pascal Frossard

Quantifying the similarity between two graphs is a fundamental algorithmic problem at the heart of many data analysis tasks for graph-based data. In this paper, we study the computational complexity of a family of similarity measures based…

Discrete Mathematics · Computer Science 2022-07-04 Timo Gervens , Martin Grohe

We address the problem of finding the nearest graph Laplacian to a given matrix, with the distance measured using the Frobenius norm. Specifically, for the directed graph Laplacian, we propose two novel algorithms by reformulating the…

Optimization and Control · Mathematics 2024-04-05 Kazuhiro Sato , Masato Suzuki

This paper proposes a family of graph metrics for measuring distances between graphs of different sizes. The proposed metric family defines a general form of the graph generalised optimal sub-pattern assignment (GOSPA) metric and is also…

Social and Information Networks · Computer Science 2025-06-24 Jinhao Gu , Ángel F. García-Fernández , Robert E. Firth , Lennart Svensson

Stress models are a promising approach for graph drawing. They minimize the weighted sum of the squared errors of the Euclidean and desired distances for each node pair. The desired distance typically uses the graph-theoretic distances…

Data Structures and Algorithms · Computer Science 2024-03-26 Yosuke Onoue

Distance matrices of graphs were introduced by Graham and Pollack in 1971 to study a problem in communications. Since then, there has been extensive research on the distance matrices of graphs -- a 2014 survey by Aouchiche and Hansen on…

Combinatorics · Mathematics 2021-05-06 Leslie Hogben , Carolyn Reinhart

We study fundamental graph parameters such as the Diameter and Radius in directed graphs, when distances are measured using a somewhat unorthodox but natural measure: the distance between $u$ and $v$ is the minimum of the shortest path…

Data Structures and Algorithms · Computer Science 2019-06-18 Mina Dalirrooyfard , Virginia Vassilevska Williams , Nikhil Vyas , Nicole Wein , Yinzhan Xu , Yuancheng Yu

For many graph-related problems, it can be essential to have a set of structurally diverse graphs. For instance, such graphs can be used for testing graph algorithms or their neural approximations. However, to the best of our knowledge, the…

Machine Learning · Computer Science 2024-12-13 Fedor Velikonivtsev , Mikhail Mironov , Liudmila Prokhorenkova

Testing for the equality of two high-dimensional distributions is a challenging problem, and this becomes even more challenging when the sample size is small. Over the last few decades, several graph-based two-sample tests have been…

Methodology · Statistics 2019-11-22 Soham Sarkar , Rahul Biswas , Anil K. Ghosh

Graphs with diverse structural characteristics play a central role in modelling and optimization tasks. The ability to generate different types of graphs that exhibit shared properties is likewise essential for algorithm selection and…

Neural and Evolutionary Computing · Computer Science 2026-03-31 Hendrik Richter , Frank Neumann

We develop a theory to measure the variance and covariance of probability distributions defined on the nodes of a graph, which takes into account the distance between nodes. Our approach generalizes the usual (co)variance to the setting of…

Physics and Society · Physics 2021-08-19 Karel Devriendt , Samuel Martin-Gutierrez , Renaud Lambiotte
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