Related papers: Compacted binary trees admit a stretched exponenti…
A compacted binary tree is a graph created from a binary tree such that repeatedly occurring subtrees in the original tree are represented by pointers to existing ones, and hence every subtree is unique. Such representations form a special…
A relaxed $k$-ary tree is an ordered directed acyclic graph with a unique source and sink in which every node has out-degree $k$. These objects arise in the compression of trees in which some repeated subtrees are factored and repeated…
We are interested in the quantitative analysis of the compaction ratio for two classical families of trees: recursive trees and plane binary increasing trees. These families are typical representatives of tree models with a small depth.…
Plane increasing trees are rooted labeled trees embedded into the plane such that the sequence of labels is increasing on any branch starting at the root. Relaxed binary trees are a subclass of unlabeled directed acyclic graphs. We…
In a recent paper, McDiarmid, Semple, and Welsh (2015) showed that the number of tree-child networks with $n$ leaves has the factor $n^{2n}$ in its main asymptotic growth term. In this paper, we improve this by completely identifying the…
A fringe subtree of a rooted tree is a subtree consisting of one of the nodes and all its descendants. In this paper, we are specifically interested in the number of non-isomorphic trees that appear in the collection of all fringe subtrees…
Any Boolean function corresponds with a complete full binary decision tree. This tree can in turn be represented in a maximally compact form as a direct acyclic graph where common subtrees are factored and shared, keeping only one copy of…
It is well known that in a binary tree the external path length minus the internal path length is exactly 2n-2, where n is the number of external nodes. We show that a generalization of the formula holds for compacted tries, replacing the…
We consider the counting problem of the number of \textit{leaf-labeled increasing trees}, where internal nodes may have an arbitrary number of descendants. The set of all such trees is a discrete representation of the genealogies obtained…
This paper introduces a new combinatorial framework for modeling the growth of binary trees through a discrete evolution process that incorporates a growing rule and an extinction rule. Building upon the theory of increasingly labeled…
We study the asymptotic number of certain monotonically labeled increasing trees arising from a generalized evolution process. The main difference between the presented model and the classical model of binary increasing trees is that the…
An evolutionary tree is a rooted tree where each internal vertex has at least two children and where the leaves are labeled with distinct symbols representing species. Evolutionary trees are useful for modeling the evolutionary history of…
Working with generating functions, the combinatorics of a recurrence relation can be expressed in a way that allows for more efficient calculation of the quantity. This is true of the Catalan numbers for an ordered binary tree…
We consider extremal problems related to decks and multidecks of rooted binary trees (a.k.a. rooted phylogenetic tree shapes). Here, the deck (resp. multideck) of a tree $T$ refers to the set (resp. multiset) of leaf induced binary subtrees…
Ge, Rusjan, and Zweifel (J. Stat. Phys. 59, 1265 (1990)) introduced a binary tree which represents all the periodic windows in the chaotic regime of iterated one-dimensional unimodal maps. We consider the scaling behavior in a modified tree…
These notes are a written version of my talk given at the CARMA workshop in June 2017, with some additional material. I presented a few concepts that have recently been used in the computation of tree-level scattering amplitudes (mostly…
Tanglegrams are a special class of graphs appearing in applications concerning cospeciation and coevolution in biology and computer science. They are formed by identifying the leaves of two rooted binary trees. We give an explicit formula…
This study is dedicated to precise distributional analyses of the height of non-plane unlabelled binary trees ("Otter trees"), when trees of a given size are taken with equal likelihood. The height of a rooted tree of size $n$ is proved to…
We propose a new arithmetic for non-empty rooted unordered trees simply called trees. After discussing tree representation and enumeration, we define the operations of tree addition, multiplication and stretch, prove their properties, and…
The size of the largest common subtree (maximum agreement subtree) of two independent uniform random binary trees on $n$ leaves is known to be between orders $n^{1/8}$ and $n^{1/2}$. By a construction based on recursive splitting and…