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The concept of midpoint percolation has recently been applied to characterize the double percolation transitions in negatively curved structures. Regular $d$-dimensional hypercubic lattices are in the present work investigated using the…

Statistical Mechanics · Physics 2010-04-16 Seung Ki Baek , Petter Minnhagen , Beom Jun Kim

The selective etching of carbon nanotubes has been widely explored as a post-synthetic route for enriching semiconducting species. As nanoelectronic applications increasingly demand pure semiconducting nanotubes for use in field-effect…

Materials Science · Physics 2025-06-26 K. Otsuka , S. Maruyama

The mechanosensitivity of cells, which determines how they are able to respond to mechanical signals received from their environment, is crucial for the functioning of all biological systems. In experiments, cells placed on cyclically…

Biological Physics · Physics 2019-01-17 John J. Molina , Ryoichi Yamamoto

We study theoretically a dramatic enhancement of spontaneous emission in metamaterials with the hyperbolic dispersion modeled as a cubic lattice of anisotropic resonant dipoles. We analyze the dependence of the Purcell factor on the source…

We propose and investigate a one-parameter probabilistic mixture of one-dimensional elementary cellular automata under the guise of a model for the dynamics of a single-species unstructured population with nonoverlapping generations in…

Statistical Mechanics · Physics 2018-03-09 J. Ricardo G. Mendonça

Microtubules (MTs) are cytoplasmic protein polymers that are essential for fundamental cellular processes including the maintenance of cell shape, organelle transport and formation of the mitotic spindle. Microtubule dynamic instability is…

Biomolecules · Quantitative Biology 2014-04-09 Chunlei Li , Jun Li , Holly V. Goodson , Mark S. Alber

Similarity analysis of microalgae growth is crucial for understanding microalgae cultivation, such analysis has not been considered before in previous studies. This letter considers the natural features of the microalgae growth phenomenon…

Biological Physics · Physics 2022-05-13 C. Y. Ma

Over the past decade, advances in super-resolution microscopy and particle-based modeling have driven an intense interest in investigating spatial heterogeneity at the level of single molecules in cells. Remarkably, it is becoming clear…

Molecular Networks · Quantitative Biology 2013-11-19 Andrew Mugler , Pieter Rein ten Wolde

The finite-size scaling theory for continuous phase transition plays an important role in determining critical point and critical exponents from the size-dependent behaviors of quantities in the thermodynamic limit. For percolation phase…

Statistical Mechanics · Physics 2017-10-10 Yong Zhu , Xiaosong Chen

The idea that information-processing systems operate near criticality to enhance computational performance is supported by scaling signatures in brain activity. However, external signals raise the question of whether this behavior is…

Neurons and Cognition · Quantitative Biology 2026-02-10 Rubén Calvo , Carles Martorell , Adrián Roig , Miguel A. Muñoz

Percolation for a planar lattice has a single percolation threshold, whereas percolation for a negatively curved lattice displays two separate thresholds. The enhanced binary tree (EBT) can be viewed as a prototype model displaying two…

Statistical Mechanics · Physics 2015-03-13 Petter Minnhagen , Seung Ki Baek

Micropatterned substrates are often used to standardize cell experiments and to quantitatively study the relation between cell shape and function. Moreover, they are increasingly used in combination with traction force microscopy on soft…

Cell Behavior · Quantitative Biology 2015-06-19 Philipp J. Albert , Ulrich S. Schwarz

Stem cells, through their ability to produce daughter stem cells and differentiate into specialized cells, are essential in the growth, maintenance, and repair of biological tissues. Understanding the dynamics of cell populations in the…

Applications · Statistics 2026-02-02 Huyen Nguyen , Haim Bar , Zhiyi Chi , Vladimir Pozdnyakov

The study of crossing probabilities - i.e. probabilities of existence of paths crossing rectangles - has been at the heart of the theory of two-dimensional percolation since its beginning. They may be used to prove a number of results on…

Probability · Mathematics 2019-01-25 Hugo Duminil-Copin , Vincent Tassion

We investigate the scaling limit of the seed bank diffusion when reproduction and migration (to and from the seed bank) happen on different time-scales. More precisely, we consider the case when migration is `slow' and reproduction is…

There is significant interest in modelling the mechanics and physics of growth of soft biological systems such as tumors and bacterial biofilms. Solid tumors account for more than 85% of cancer mortality and bacterial biofilms account for a…

Soft Condensed Matter · Physics 2024-03-29 Chockalingam Senthilnathan , Tal Cohen

This work discusses preliminary work aimed at simulating and visualizing the growth process of a tiny structure inside the cell---the microtubule. Difficulty of recording the process lies in the fact that the tissue preparation method for…

Computer Vision and Pattern Recognition · Computer Science 2011-05-31 Feiyang Yu , Ard Oerlemans , Erwin M. Bakker

Microtubules are an essential physical building block of cellular systems. They are organized using specific crosslinkers, motors, and influencers of nucleation and growth. With the addition of anti-parallel crosslinkers, microtubule…

Biological Physics · Physics 2021-06-23 Sumon Sahu , Lena Herbst , Ryan Quinn , Jennifer L. Ross

Microtubule dynamic instability allows search and capture of kinetochores during spindle formation, an important process for accurate chromosome segregation during cell division. Recent work has found that microtubule rotational diffusion…

Cytoskeletal networks can repair defects to maintain structural integrity. However, the mechanisms and dynamics of defect merging remain poorly understood. Here we report a geometry-tunable merging mechanism in microtubule-motor networks…

Soft Condensed Matter · Physics 2025-09-10 Fan Yang , Shichen Liu , Hao Wang , Heun Jin Lee , Rob Phillips , Matt Thomson