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The study of neurocognitive tasks requiring accurate localisation of activity often rely on functional Magnetic Resonance Imaging, a widely adopted technique that makes use of a pipeline of data processing modules, each involving a variety…

Computer Vision and Pattern Recognition · Computer Science 2016-10-14 Albert Vilamala , Kristoffer Hougaard Madsen , Lars Kai Hansen

Functional magnetic resonance imaging (fMRI) aims to locate activated regions in human brains when specific tasks are performed. The conventional tool for analyzing fMRI data applies some variant of the linear model, which is restrictive in…

Statistics Theory · Mathematics 2008-08-08 Chunming Zhang , Tao Yu

Hyperspectral neutron computed tomography is a tomographic imaging technique in which thousands of wavelength-specific neutron radiographs are measured for each tomographic view. In conventional hyperspectral reconstruction, data from each…

Direct reconstruction of positron emission tomography (PET) data using deep neural networks is a growing field of research. Initial results are promising, but often the networks are complex, memory utilization inefficient, produce…

Image and Video Processing · Electrical Eng. & Systems 2020-06-16 William Whiteley , Vladimir Panin , Chuanyu Zhou , Jorge Cabello , Deepak Bharkhada , Jens Gregor

This study proposes a deep learning-based framework for automated segmentation of brain regions and classification of amyloid positivity using positron emission tomography (PET) images alone, without the need for structural MRI or CT. A 3D…

Image and Video Processing · Electrical Eng. & Systems 2025-07-31 Penghan Zhu , Shurui Mei , Shushan Chen , Xiaobo Chu , Shanbo He , Ziyi Liu

Understanding the dynamics of brain tumor progression is essential for optimal treatment planning. Cast in a mathematical formulation, it is typically viewed as evaluation of a system of partial differential equations, wherein the…

Quantitative Methods · Quantitative Biology 2020-01-13 Ivan Ezhov , Jana Lipkova , Suprosanna Shit , Florian Kofler , Nore Collomb , Benjamin Lemasson , Emmanuel Barbier , Bjoern Menze

Human vision models are at the core of image processing. For instance, classical approaches to the problem of image quality are based on models that include knowledge about human vision. However, nowadays, deep learning approaches have…

Computer Vision and Pattern Recognition · Computer Science 2025-05-20 Jorge Vila-Tomás , Pablo Hernández-Cámara , Valero Laparra , Jesús Malo

Radio interferometry invariably suffers from an incomplete coverage of the spatial Fourier space, which leads to imaging artifacts. The current state-of-the-art technique is to create an image by Fourier-transforming the incomplete…

Instrumentation and Methods for Astrophysics · Physics 2024-12-19 F. Geyer , K. Schmidt , J. Kummer , M. Brüggen , H. W. Edler , D. Elsässer , F. Griese , A. Poggenpohl , L. Rustige , W. Rhode

Recent technical advances lead to the coupling of PET and MRI scanners, enabling to acquire functional and anatomical data simultaneously. In this paper, we propose a tight frame based PET-MRI joint reconstruction model via the joint…

Numerical Analysis · Mathematics 2018-01-08 Jae Kyu Choi , Chenglong Bao , Xiaoqun Zhang

The rapid advancement of Artificial Intelligence (AI) in biomedical imaging and radiotherapy is hindered by the limited availability of large imaging data repositories. With recent research and improvements in denoising diffusion…

Image and Video Processing · Electrical Eng. & Systems 2024-03-27 Rowan Bradbury , Katherine A. Vallis , Bartlomiej W. Papiez

Deep learning-based reconstruction of positron emission tomography(PET) data has gained increasing attention in recent years. While these methods achieve fast reconstruction,concerns remain regarding quantitative accuracy and the presence…

Inspired by their success in solving challenging inverse problems in computer vision, implicit neural representations (INRs) have been recently proposed for reconstruction in low-dose/sparse-view X-ray computed tomography (CT). An INR…

Image and Video Processing · Electrical Eng. & Systems 2025-04-21 Mahrokh Najaf , Gregory Ongie

The aim of this paper is to discuss potential advances in PET kinetic models and direct reconstruction of kinetic parameters. As a prominent example we focus on a typical task in perfusion imaging and derive a system of…

Optimization and Control · Mathematics 2014-11-20 Louise Reips , Martin Burger , Ralf Engbers

Intraoperative imaging techniques for reconstructing deformable tissues in vivo are pivotal for advanced surgical systems. Existing methods either compromise on rendering quality or are excessively computationally intensive, often demanding…

Computer Vision and Pattern Recognition · Computer Science 2023-12-27 Chen Yang , Kailing Wang , Yuehao Wang , Qi Dou , Xiaokang Yang , Wei Shen

Multispectral photoacoustic imaging (PAI) is an emerging imaging modality which enables the recovery of functional tissue parameters such as blood oxygenation. However, the underlying inverse problems are potentially ill-posed, meaning that…

Affine registration plays a crucial role in PET/CT imaging, where aligning PET with CT images is challenging due to their respective functional and anatomical representations. Despite the significant promise shown by recent deep learning…

Image and Video Processing · Electrical Eng. & Systems 2024-09-24 Junyu Chen , Yihao Liu , Shuwen Wei , Aaron Carass , Yong Du

For whole-body (WB) kinetic modeling based on a typical PET scanner, a multi-pass multi-bed scanning protocol is necessary given the limited axial field-of-view. Such a protocol introduces loss of early-dynamics in time-activity curves…

Medical Physics · Physics 2024-05-14 Kyung-Nam Lee , Arman Rahmim , Carlos Uribe

Objective: Deformable image registration is a fundamental problem in medical image analysis, with applications such as longitudinal studies, population modeling, and atlas based image segmentation. Registration is often phrased as an…

Computer Vision and Pattern Recognition · Computer Science 2018-10-22 Simon Ekström , Filip Malmberg , Håkan Ahlström , Joel Kullberg , Robin Strand

In the context of dynamic emission tomography, the conventional processing pipeline consists of independent image reconstruction of single time frames, followed by the application of a suitable kinetic model to time activity curves (TACs)…

Applications · Statistics 2018-08-28 Michele Scipioni , Stefano Pedemonte , Maria Filomena Santarelli , Luigi Landini

Image segmentation is a popular area of research in computer vision that has many applications in automated image processing. A recent technique called piecewise flat embeddings (PFE) has been proposed for use in image segmentation; PFE…

Computer Vision and Pattern Recognition · Computer Science 2016-12-21 Renee T. Meinhold , Tyler L. Hayes , Nathan D. Cahill