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Predators often consume multiple prey and by mutually subsidizing a shared predator, the prey may reciprocally harm each other. When predation levels are high, this apparent competition can culminate in a prey species being displaced.…

Populations and Evolution · Quantitative Biology 2019-02-12 Sebastian J. Schreiber , Swati Patel

Currently, two main approaches exist to distinguish differential susceptibility from diathesis-stress and vantage sensitivity in genotype x environment interaction (GxE) research: Regions of significance (RoS) and competitive-confirmatory…

1. Abrupt environmental changes can lead to evolutionary shifts in trait evolution. Identifying these shifts is an important step in understanding the evolutionary history of phenotypes. 2. We propose an ensemble variable selection method…

Populations and Evolution · Quantitative Biology 2022-04-14 Wensha Zhang , Toby Kenney , Lam Si Tung Ho

Markov models are extensively used in the analysis of molecular evolution. A recent line of research suggests that pairs of proteins with functional and physical interactions co-evolve with each other. Here, by analyzing hundreds of…

Populations and Evolution · Quantitative Biology 2010-08-05 Tamir Tuller , Elchanan Mossel

In a complex system, the individual components are neither so tightly coupled or correlated that they can all be treated as a single unit, nor so uncorrelated that they can be approximated as independent entities. Instead, patterns of…

Populations and Evolution · Quantitative Biology 2015-09-15 Blake C. Stacey

A common assumption in evolutionary thought is that adaptation drives an increase in biological complexity. However, the rules governing evolution of complexity appear more nuanced. Evolution is deeply connected to learning, where…

Populations and Evolution · Quantitative Biology 2025-08-06 Hagai Rappeport , Mor Nitzan

Among plausible causes for replicability failure, one that has not received sufficient attention is the environment in which the research is conducted. Consisting of the population, equipment, personnel, and various conditions such as…

Methodology · Statistics 2020-09-01 James J. Higgins , Michael J. Higgins , Jinguang Lin

The vertebrate motor system employs dimensionality-reducing strategies to limit the complexity of movement coordination, for efficient motor control. But when environments are dense with hidden action-outcome contingencies, movement…

Neurons and Cognition · Quantitative Biology 2026-01-06 Ryutaro Uchiyama

With the establishment of global biological monitor network and development of remote sensing technology, data won't be a limitation, but the variance brought by spatial heterogeneous and fractal will influence correlation coefficient…

Applications · Statistics 2017-10-02 Xiatong Cai , Guangpeng Pei , Yuen Zhu , Donggang Guo , Hua Li

The onset of life is often framed around membrane bound compartments and encoded metabolism, leaving unresolved how spatial organization arose before stable boundaries. In this context, environmental gradients are usually treated as…

Other Quantitative Biology · Quantitative Biology 2026-04-23 Arturo Tozzi

Bacteriophage-bacteria interactions are central to microbial ecology, influencing evolution, biogeochemical cycles, and pathogen behavior. Most theoretical models assume static environments and passive bacterial hosts, neglecting the joint…

Biological Physics · Physics 2025-12-10 Hao-Neng Luo , Zhi-Xi Wu , Jian-Yue Guan

In evolutionary robotics, jointly optimising the design and the controller of robots is a challenging task due to the huge complexity of the solution space formed by the possible combinations of body and controller. We focus on the…

Robotics · Computer Science 2024-03-18 Léni K. Le Goff , Edgar Buchanan , Emma Hart

We study evolutionary processes induced by spatio-temporal dynamics in prebiotic evolution. Using numerical simulations we demonstrate that hypercycles emerge from complex interaction structures in multispecies systems. In this work we also…

Populations and Evolution · Quantitative Biology 2007-05-23 Pan-Jun Kim , Hawoong Jeong

The emergence of multicellularity and developmental programs are among the major problems of evolutionary biology. Traditionally, research in this area has been based on the combination of data analysis and experimental work on one hand and…

Populations and Evolution · Quantitative Biology 2014-03-14 Ricard V. Solé , Salva Duran-Nebreda

Many organisms live in populations structured by space and by class, exhibit plastic responses to their social partners, and are subject to non-additive ecological and fitness effects. Social evolution theory has long recognized that all of…

Populations and Evolution · Quantitative Biology 2014-04-24 Jeremy Van Cleve , Erol Akçay

Exploiting others is beneficial individually but it could also be detrimental globally. The reverse is also true: a higher cooperation level may change the environment in a way that is beneficial for all competitors. To explore the possible…

Physics and Society · Physics 2018-02-23 Attila Szolnoki , Xiaojie Chen

Many species of microbes cooperate by producing public goods from which they collectively benefit. However, these populations are under the risk of being taken over by cheating mutants that do not contribute to the pool of public goods.…

Populations and Evolution · Quantitative Biology 2023-12-20 Gurdip Uppal , Dervis Can Vural

Designing robots capable of generating interpretable behavior is a prerequisite for achieving effective human-robot collaboration. This means that the robots need to be capable of generating behavior that aligns with human expectations and,…

Artificial Intelligence · Computer Science 2020-08-04 Anagha Kulkarni , Sarath Sreedharan , Sarah Keren , Tathagata Chakraborti , David Smith , Subbarao Kambhampati

A major focus of the planetary science and astrobiology community is the understanding of planetary habitability, including the myriad factors that control the evolution and sustainability of temperate surface environments such as that of…

Instrumentation and Methods for Astrophysics · Physics 2024-03-15 Stephen R. Kane , Paul K. Byrne

We present an agent-based model inspired by the Evolutionary Minority Game (EMG), albeit strongly adapted to the case of competition for limited resources in ecology. The agents in this game become able, after some time, to predict the a…

Populations and Evolution · Quantitative Biology 2008-04-23 Daniel Campos , Josep E. Llebot , Vicenç Méndez
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