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The Python package pylimer-tools is a comprehensive toolkit for computational studies of polymer networks, particularly bead-spring networks. The package provides functionality to generate polymer networks using Monte Carlo (MC) procedures…

Soft Condensed Matter · Physics 2025-08-18 Tim Bernhard , Fabian Schwarz , Andrei A. Gusev

The halo model is a successful framework for describing the distribution of matter in the Universe -- from weak lensing observables to galaxy 2-point correlation functions. We review the basic formulation of the halo model and several of…

Cosmology and Nongalactic Astrophysics · Physics 2021-09-01 Steven G. Murray , Benedikt Diemer , Zhaoting Chen , Anton Glenn Neuhold , M. A. Schnapp , Tia Peruzzi , Daniel Blevins , Trent Engelman

As astronomical data grows in volume and complexity, the scalability of analysis software becomes increasingly important. At the same time, astrophysics analysis software relies heavily on open-source contributions, so languages and tools…

Instrumentation and Methods for Astrophysics · Physics 2024-02-01 Edward Berman , Jacqueline McCleary

Various fields of science and engineering rely on linear algebra for large scale data analysis, modeling and simulation, machine learning, and other applied problems. Linear algebra computations often dominate the execution time of such…

Mathematical Software · Computer Science 2014-08-07 Boyana Norris , Sa-Lin Bernstein , Ramya Nair , Elizabeth Jessup

Predictive simulations and experimental design involving extreme aero-chemo-thermo-mechanical regimes require high-fidelity material representation across diverse physical states. However, data for metals, polymers, and propellants,…

HolPy is an interactive theorem proving system implemented in Python. It uses higher-order logic as the logical foundation. Its main features include a pervasive use of macros in producing, checking, and storing proofs, a JSON-based format…

Logic in Computer Science · Computer Science 2020-01-28 Bohua Zhan

This is a companion Focus Demonstration article to the PyMUSE python package, demonstrating its usage and utilities for VLT/MUSE data analysis, that include a wide range of options for spectra extractions, the creation of different types of…

Instrumentation and Methods for Astrophysics · Physics 2018-03-20 Ismael Pessa , Nicolas Tejos , Cristobal Moya

Large-scale software systems generate vast volumes of system logs that are essential for monitoring, diagnosing, and performance optimization. However, the unstructured nature and ever-growing scale of these logs present significant…

Software Engineering · Computer Science 2025-04-04 Shu-Wei Huang , Xingfang Wu , Heng Li

High-energy physics phenomenology often requires linking multiple computational tools to evaluate observables, likelihoods, and experimental constraints across nontrivial parameter spaces. In this work, we introduce Jarvis-HEP, a…

High Energy Physics - Phenomenology · Physics 2026-04-29 Erdong Guo , Paul Jackson , Jin Min Yang , Pengxuan Zhu

NLP Workbench is a web-based platform for text mining that allows non-expert users to obtain semantic understanding of large-scale corpora using state-of-the-art text mining models. The platform is built upon latest pre-trained models and…

Computation and Language · Computer Science 2024-03-06 Peiran Yao , Matej Kosmajac , Abeer Waheed , Kostyantyn Guzhva , Natalie Hervieux , Denilson Barbosa

The analysis of optical images of galaxy-galaxy strong gravitational lensing systems can provide important information about the distribution of dark matter at small scales. However, the modeling and statistical analysis of these images is…

Cosmology and Nongalactic Astrophysics · Physics 2020-11-30 Adam Coogan , Konstantin Karchev , Christoph Weniger

Most of the existing Large Language Model (LLM) benchmarks on scientific problem reasoning focus on problems grounded in high-school subjects and are confined to elementary algebraic operations. To systematically examine the reasoning…

Computation and Language · Computer Science 2024-07-01 Xiaoxuan Wang , Ziniu Hu , Pan Lu , Yanqiao Zhu , Jieyu Zhang , Satyen Subramaniam , Arjun R. Loomba , Shichang Zhang , Yizhou Sun , Wei Wang

To reduce and analyze astronomical images, astronomers can rely on a wide range of libraries providing low-level implementations of legacy algorithms. However, combining these routines into robust and functional pipelines requires a major…

Instrumentation and Methods for Astrophysics · Physics 2021-11-17 Lionel J. Garcia , Mathilde Timmermans , Francisco J. Pozuelos , Elsa Ducrot , Michaël Gillon , Laetitia Delrez , Robert D. Wells , Emmanuël Jehin

This paper describes the design and implementation of Stingray, a library in Python built to perform time series analysis and related tasks on astronomical light curves. Its core functionality comprises a range of Fourier analysis…

Instrumentation and Methods for Astrophysics · Physics 2019-08-12 D. Huppenkothen , M. Bachetti , A. L. Stevens , S. Migliari , P. Balm , O. Hammad , U. M. Khan , H. Mishra , H. Rashid , S. Sharma , R. V. Blanco , E. M. Ribeiro

Gravitational microlensing is a powerful tool that can be used to find and measure the mass of isolated and dark compact objects. In many microlensing events, the lens, the source, or both may be a binary system. In this work, we introduce…

Solar and Stellar Astrophysics · Physics 2026-03-30 T. Dex Bhadra , J. R. Lu , Natasha S. Abrams , Andrew Scharf , Edward Broadberry , Casey Lam , Macy J. Huston

Modern signal processing (SP) pipelines, whether model-based or data-driven, often constrained by complex and fragmented workflow, rely heavily on expert knowledge and manual engineering, and struggle with adaptability and generalization…

Machine Learning · Computer Science 2025-10-31 Junlong Ke , Qiying Hu , Shenghai Yuan , Yuecong Xu , Jianfei Yang

This paper presents SunPy (version 0.5), a community-developed Python package for solar physics. Python, a free, cross-platform, general-purpose, high-level programming language, has seen widespread adoption among the scientific community,…

We present sensipy, an open-source Python toolkit for simulating observations of transient astrophysical sources, particularly in the high-energy (HE, keV-GeV) and very-high-energy (VHE, GeV-TeV) gamma-ray ranges. The most explosive events…

High Energy Astrophysical Phenomena · Physics 2026-02-16 Jarred G. Green , Barbara Patricelli , Antonio Stamerra , Monica Seglar-Arroyo

SModelS is an automatized tool enabling the fast interpretation of simplified model results from the LHC within any model of new physics respecting a $\mathbb{Z}_2$ symmetry. In this contribution, we report on two important updates of…

We introduce NebulOS, a Big Data platform that allows a cluster of Linux machines to be treated as a single computer. With NebulOS, the process of writing a massively parallel program for a datacenter is no more complicated than writing a…

Instrumentation and Methods for Astrophysics · Physics 2016-09-15 Nathaniel R. Stickley , Miguel A. Aragon-Calvo
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