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Biological transport networks adapt through dynamic interactions between material transport and structural modification during growth and development. In this work, we present a model of transport network growth driven by local material…

Biological Physics · Physics 2025-03-27 Chanoknun Sintavanuruk , Yoichiro Mori , Reza Farhadifar , Eleni Katifori

Due to climatic changes, excessive grazing, and deforestation, semi-arid and arid ecosystems are vulnerable to desertification and land degradation. As aridity increases, vegetation cover often self-organizes into spatial patterns before…

Populations and Evolution · Quantitative Biology 2026-04-27 David Pinto-Ramos , Marcel Gabriel Clerc , Abdelkader Makhoute , Mustapha Tlidi

Surface growth, by association or dissociation of material on the boundaries of a body, is ubiquitous in both natural and engineering systems. It is the fundamental mechanism by which biological materials grow, starting from the level of a…

Soft Condensed Matter · Physics 2019-03-06 Rami Abi-Akl , Rohan Abeyaratne , Tal Cohen

The most general single species autonomous reaction-diffusion model on a Cayley tree with nearest-neighbor interactions is introduced. The stationary solutions of such models, as well as their dynamics, are discussed. To study dynamics of…

Mathematical Physics · Physics 2014-07-22 Mohammad Khorrami , Amir Aghamohammadi

We present convincing empirical evidence for an effective and general strategy for building accurate small models. Such models are attractive for interpretability and also find use in resource-constrained environments. The strategy is to…

Machine Learning · Computer Science 2024-04-30 Abhishek Ghose

Experimental data regarding auxin and venation formation exist at both macroscopic and molecular scales, and we attempt to unify them into a comprehensive model for venation formation. We begin with a set of principles to guide an abstract…

Quantitative Methods · Quantitative Biology 2009-05-28 Pavel Dimitrov , Steven W. Zucker

Many research fields, reaching from social networks and epidemiology to biology and physics, have experienced great advance from recent developments in random graphs and network theory. In this paper we propose to view percolation on a…

Soft Condensed Matter · Physics 2019-08-21 Verena Schamboeck , Piet D. Iedema , Ivan Kryven

Complex systems can be characterized by classes of equivalency of their elements defined according to system specific rules. We propose a generalized preferential attachment model to describe the class size distribution. The model…

Dune fields are commonly associated with periodic patterns that are among the most recognizable landscapes on Earth and other planetary bodies. However, in zones of limited sediment supply, where periodic dunes elongate and align in the…

Models of structure formation in the universe postulate that matter distributions observed today in galaxy catalogs arise, through a complex non-linear dynamics, by gravitational evolution from a very uniform initial state. Dark matter…

Statistical Mechanics · Physics 2009-11-11 Luciano Pietronero , Francesco Sylos Labini

Understanding the relationship between genomic variation and variation in phenotypes for quantitative traits such as physiology, yield, fitness or behavior, will provide important insights for both predicting adaptive evolution and for…

Regardless of a system's complexity or scale, its growth can be considered to be a spontaneous thermodynamic response to a local convergence of down-gradient material flows. Here it is shown how growth can be constrained to a few distinct…

Atmospheric and Oceanic Physics · Physics 2012-11-14 Timothy J. Garrett

In harsh environments, organisms may self-organize into spatially patterned systems in various ways. So far, studies of ecosystem spatial self-organization have primarily focused on apparent orders reflected by regular patterns. However,…

Populations and Evolution · Quantitative Biology 2023-11-15 Wensi Hu , Quan-Xing Liu , Bo Wang , Nuo Xu , Lijuan Cui , Chi Xu

We consider a generalization of the classical logistic growth model introducing more than one inflection point. The growth, called multi-sigmoidal, is firstly analyzed from a deterministic point of view in order to obtain the main…

Populations and Evolution · Quantitative Biology 2024-01-31 Antonio Di Crescenzo , Paola Paraggio , Patricia Román-Román , Francisco Torres-Ruiz

Random copying is a simple model for population dynamics in the absence of selection, and has been applied to both biological and cultural evolution. In this work, we investigate the effect that spatial structure has on the dynamics. We…

Physics and Society · Physics 2015-05-26 Richard A Blythe

We propose a new model of cluster growth according to which the probability that a new unit is placed in a point at a distance $r$ from the city center is a Gaussian with mean equal to the cluster radius and variance proportional to the…

Physics and Society · Physics 2007-05-23 M. Pica Ciamarra , A. Coniglio

We study a size-structured model proposed in [1] C. Barril, \`A. Calsina, O. Diekmann, J. Z. Farkas, On competition through growth reduction, e-print arXiv:2303.02981, to describe the dynamics of trees growth in the forest. Our approach to…

Dynamical Systems · Mathematics 2024-01-19 Franco Herrera , Sergei Trofimchuk

Complex networks from such different fields as biology, technology or sociology share similar organization principles. The possibility of a unique growth mechanism promises to uncover universal origins of collective behaviour. In…

Disordered Systems and Neural Networks · Physics 2009-09-29 Chaoming Song , Shlomo Havlin , Hernán A. Makse

Spatial networks of land cover are well-described by power law rank-size distributions. Continuous field proxies for human settlements, agriculture and forest cover have similar spatial scaling properties spanning 4 to 5 orders of…

Physics and Society · Physics 2015-12-07 Christopher Small , Daniel Sousa

We propose a class of evolutionary models that involves an arbitrary exchangeable process as the breeding process and different selection schemes. In those models, a new genome is born according to the breeding process, and then a genome is…

Neural and Evolutionary Computing · Computer Science 2020-08-25 Jüri Lember , Chris Watkins
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