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The coordination of the immune system and its components is essential for the body to maintain a healthy status. Recent clinical studies show that breast cancer patients with high Dendritic cell clustering in tumour draining lymph nodes…

Cell Behavior · Quantitative Biology 2026-04-21 Domenic P. J. Germano , Federico Frascoli , Robyn P. Araujo , Peter P. Lee , Peter S. Kim

Pattern-diluted associative networks were introduced recently as models for the immune system, with nodes representing T-lymphocytes and stored patterns representing signalling protocols between T- and B-lymphocytes. It was shown earlier…

Disordered Systems and Neural Networks · Physics 2015-04-17 Elena Agliari , Alessia Annibale , Adriano Barra , A. C. C. Coolen , Daniele Tantari

The analysis of system calls is one method employed by anomaly detection systems to recognise malicious code execution. Similarities can be drawn between this process and the behaviour of certain cells belonging to the human immune system,…

Artificial Intelligence · Computer Science 2010-07-05 Jungwon Kim , Julie Greensmith , Jamie Twycross , Uwe Aickelin

As a system of integrated homeostasis, life is susceptible to disruptions by visceral inflammation, which can disturb internal environment equilibrium. The role of body-spread subcutaneous fascia (scFascia) in this process is poorly…

Genomics · Quantitative Biology 2025-03-25 Haixiang Huang , Bingbing Shen , Zhenwei Zhang , Jianming Yue , Lu Mei , Qiusheng Chen

Lymphocyte selection is a fundamental operation of adaptive immunity. In order to produce B-lymphocytes with a desired antigenic profile, a process of mutation-selection occurs in the germinal center, which is part of the lymph nodes. We…

Analysis of PDEs · Mathematics 2015-01-28 Vuk Milisic , Gilles Wainrib

We consider the problem of self tolerance in the frame of a minimalistic model of the idiotypic network. A node of this network represents a population of B lymphocytes of the same idiotype which is encoded by a bit string. The links of the…

Cell Behavior · Quantitative Biology 2013-08-30 Robert Schulz , Benjamin Werner , Ulrich Behn

Ever since the advent of the neuron doctrine more than a century ago, information processing in the brain is widely believed to mainly follow the forward pre to post-synaptic neurons direction. Challenging this prevalent view, in this…

Neurons and Cognition · Quantitative Biology 2021-09-15 Zied Ben Houidi

How humans and machines make sense of current inputs for relation reasoning and question-answering while putting the perceived information into context of our past memories, has been a challenging conundrum in cognitive science and…

Machine Learning · Computer Science 2024-05-21 Xiangyu Zeng , Jie Lin , Piao Hu , Ruizheng Huang , Zhicheng Zhang

In the mammalian brain, newly acquired memories depend on the hippocampus for maintenance and recall, but over time the neocortex takes over these functions, rendering memories hippocampus-independent. The process responsible for this…

Neurons and Cognition · Quantitative Biology 2021-07-02 Peter Helfer , Thomas R. Shultz

Working memory often appears to exceed its basic span by organizing items into compact representations called chunks. Chunking can be learned over time for familiar inputs; however, it can also arise spontaneously for novel stimuli. Such…

Neurons and Cognition · Quantitative Biology 2025-09-19 Weishun Zhong , Mikhail Katkov , Misha Tsodyks

The brain is a highly efficient system evolved to achieve high performance with limited resources. We propose that dendrites make information processing and storage in the brain more efficient through the segregation of inputs and their…

Neurons and Cognition · Quantitative Biology 2023-06-13 Roman Makarov , Michalis Pagkalos , Panayiota Poirazi

The growth of a tissue, which depends on cell-cell interactions and biologically relevant process such as cell division and apoptosis, is regulated by a mechanical feedback mechanism. We account for these effects in a minimal…

Soft Condensed Matter · Physics 2022-07-06 Sumit Sinha , Xin Li , Rajsekhar Das , D. Thirumalai

A specific memory is stored in a cell assembly that is activated during fear learning in mice; however, research regarding cell assemblies associated with procedural and habit learning processes is lacking. In modeling studies, simulations…

Neurons and Cognition · Quantitative Biology 2020-11-09 Takahiro Homma

An interesting inference drawn by some Covid-19 epidemiological models is that there exists a proportion of the population who are not susceptible to infection -- even at the start of the current pandemic. This paper introduces a model of…

Quantitative Methods · Quantitative Biology 2020-09-18 Thomas Parr , Anjali Bhat , Peter Zeidman , Aimee Goel , Alexander J. Billig , Rosalyn Moran , Karl J. Friston

The long-time dynamics of somatic adaptability in immune system is simulated by a simple physical model. The immune system described by the model exhibits a scale free behavior as is observed in living systems. The balance between the…

Biological Physics · Physics 2009-12-22 Shiro Saito , Osamu Narikiyo

Clinical studies have indicated that in malignant surveillances fluctuations in the population of certain effector T-cell repertoire become suppressed. Motivated by such observations and in an attempt to quantify adaptive human response to…

Molecular Networks · Quantitative Biology 2015-05-19 Susmita Roy , Biman Bagchi

Neural inflammation immediately follows the onset of ischemic stroke. During this process, microglial cells can be activated into two different phenotypes: the M1 phenotype, which can worsen brain injury by producing pro-inflammatory…

Cell Behavior · Quantitative Biology 2021-07-23 Sara Amato , Andrea Arnold

A delayed model describing the dynamics of HIV (Human Immunodeficiency Virus) with CTL (Cytotoxic T Lymphocytes) immune response is investigated. The model includes four nonlinear differential equations describing the evolution of…

Optimization and Control · Mathematics 2018-06-13 Karam Allali , Sanaa Harroudi , Delfim F. M. Torres

In the past, the development of vaccines and immunotherapeutics relied heavily on trial-and-error experimentation and extensive in vivo testing, often requiring years of pre-clinical and clinical trials. Today, artificial intelligence (AI)…

Artificial Intelligence · Computer Science 2025-06-17 Elhoucine Elfatimi , Yassir Lekbach , Swayam Prakash , Lbachir BenMohamed

The current study of cell architecture of inflammation in histopathology images commonly performed for diagnosis and research purposes excludes a lot of information available on the biopsy slide. In autoimmune diseases, major outstanding…

Image and Video Processing · Electrical Eng. & Systems 2022-10-25 Pranav Singh , Jacopo Cirrone