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Recent advances in 3D fully convolutional networks (FCN) have made it feasible to produce dense voxel-wise predictions of volumetric images. In this work, we show that a multi-class 3D FCN trained on manually labeled CT scans of several…

Computer Vision and Pattern Recognition · Computer Science 2018-04-13 Holger R. Roth , Hirohisa Oda , Xiangrong Zhou , Natsuki Shimizu , Ying Yang , Yuichiro Hayashi , Masahiro Oda , Michitaka Fujiwara , Kazunari Misawa , Kensaku Mori

Convolutional neural networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they have not demonstrated sufficiently accurate and robust results for clinical use. In addition, they are…

Computer Vision and Pattern Recognition · Computer Science 2018-07-23 Guotai Wang , Wenqi Li , Maria A. Zuluaga , Rosalind Pratt , Premal A. Patel , Michael Aertsen , Tom Doel , Anna L. David , Jan Deprest , Sebastien Ourselin , Tom Vercauteren

Automatic segmentation of abdomen organs using medical imaging has many potential applications in clinical workflows. Recently, the state-of-the-art performance for organ segmentation has been achieved by deep learning models, i.e.,…

Computer Vision and Pattern Recognition · Computer Science 2019-10-16 Jinzheng Cai , Yingda Xia , Dong Yang , Daguang Xu , Lin Yang , Holger Roth

This paper reports Deep LOGISMOS approach to 3D tumor segmentation by incorporating boundary information derived from deep contextual learning to LOGISMOS - layered optimal graph image segmentation of multiple objects and surfaces. Accurate…

Computer Vision and Pattern Recognition · Computer Science 2018-01-29 Zhihui Guo , Ling Zhang , Le Lu , Mohammadhadi Bagheri , Ronald M. Summers , Milan Sonka , Jianhua Yao

Automated segmentation of esophagus is critical in image guided/adaptive radiotherapy of lung cancer to minimize radiation-induced toxicities such as acute esophagitis. We developed a semantic physics-based data augmentation method for…

Image and Video Processing · Electrical Eng. & Systems 2021-02-02 Sadegh R Alam , Tianfang Li , Pengpeng Zhang , Si-Yuan Zhang , Saad Nadeem

Robust automated organ segmentation is a prerequisite for computer-aided diagnosis (CAD), quantitative imaging analysis and surgical assistance. For high-variability organs such as the pancreas, previous approaches report undesirably low…

Computer Vision and Pattern Recognition · Computer Science 2016-03-08 Amal Farag , Le Lu , Holger R. Roth , Jiamin Liu , Evrim Turkbey , Ronald M. Summers

In radiotherapy planning, manual contouring is labor-intensive and time-consuming. Accurate and robust automated segmentation models improve the efficiency and treatment outcome. We aim to develop a novel hybrid deep learning approach,…

Image and Video Processing · Electrical Eng. & Systems 2022-01-19 Zhuangzhuang Zhang , Tianyu Zhao , Hiram Gay , Weixiong Zhang , Baozhou Sun

Modeling the absorbed dose during X-ray imaging is essential for optimizing radiation exposure. Monte Carlo simulations (MCS) are the gold standard for precise 3D dose estimation but require significant computation time. Deep learning…

Medical Physics · Physics 2025-02-14 Maxime Rousselot , Jing Zhang , Didier Benoit , Chi-Hieu Pham , Julien Bert

Cone-beam CT (CBCT) has been widely used in image guided radiation therapy (IGRT) to acquire updated volumetric anatomical information before treatment fractions for accurate patient alignment purpose. However, the excessive x-ray imaging…

Medical Physics · Physics 2010-04-13 Xun Jia , Yifei Lou , John Lewis , Ruijiang Li , Xuejun Gu , Chunhua Men , William Y. Song , Steve B. Jiang

Computed Tomography (CT) takes X-ray measurements on the subjects to reconstruct tomographic images. As X-ray is radioactive, it is desirable to control the total amount of dose of X-ray for safety concerns. Therefore, we can only select a…

Medical Physics · Physics 2021-09-15 Ziju Shen , Yufei Wang , Dufan Wu , Xu Yang , Bin Dong

Lung cancer is the leading cause of cancer deaths. Early detection through low-dose computed tomography (CT) screening has been shown to significantly reduce mortality but suffers from a high false positive rate that leads to unnecessary…

Image and Video Processing · Electrical Eng. & Systems 2019-06-04 Jason L. Causey , Yuanfang Guan , Wei Dong , Karl Walker , Jake A. Qualls , Fred Prior , Xiuzhen Huang

Automated volumetric segmentation of the pancreas on cross-sectional imaging is needed for diagnosis and follow-up of pancreatic diseases. While CT-based pancreatic segmentation is more established, MRI-based segmentation methods are…

Anatomical segmentation of organs in ultrasound images is essential to many clinical applications, particularly for diagnosis and monitoring. Existing deep neural networks require a large amount of labeled data for training in order to…

Image and Video Processing · Electrical Eng. & Systems 2023-08-01 Yordanka Velikova , Mohammad Farid Azampour , Walter Simson , Vanessa Gonzalez Duque , Nassir Navab

With pervasive applications of medical imaging in health-care, biomedical image segmentation plays a central role in quantitative analysis, clinical diagno- sis, and medical intervention. Since manual anno- tation su ers limited…

Computer Vision and Pattern Recognition · Computer Science 2018-03-14 Xiaowei Xu , Qing Lu , Yu Hu , Lin Yang , Sharon Hu , Danny Chen , Yiyu Shi

Automated classification of human anatomy is an important prerequisite for many computer-aided diagnosis systems. The spatial complexity and variability of anatomy throughout the human body makes classification difficult. "Deep learning"…

Computer Vision and Pattern Recognition · Computer Science 2015-09-17 Holger R. Roth , Christopher T. Lee , Hoo-Chang Shin , Ari Seff , Lauren Kim , Jianhua Yao , Le Lu , Ronald M. Summers

Multi-organ segmentation is one of most successful applications of deep learning in medical image analysis. Deep convolutional neural nets (CNNs) have shown great promise in achieving clinically applicable image segmentation performance on…

Image and Video Processing · Electrical Eng. & Systems 2020-12-18 Hao Tang , Xingwei Liu , Kun Han , Shanlin Sun , Narisu Bai , Xuming Chen , Huang Qian , Yong Liu , Xiaohui Xie

Purpose: Interpreting chest radiographs (CXR) remains challenging due to the ambiguity of overlapping structures such as the lungs, heart, and bones. To address this issue, we propose a novel method for extracting fine-grained anatomical…

Image and Video Processing · Electrical Eng. & Systems 2023-06-08 Constantin Seibold , Alexander Jaus , Matthias A. Fink , Moon Kim , Simon Reiß , Ken Herrmann , Jens Kleesiek , Rainer Stiefelhagen

Precision medicine in the quantitative management of chronic diseases and oncology would be greatly improved if the Computed Tomography (CT) scan of any patient could be segmented, parsed and analyzed in a precise and detailed way. However,…

Early detection of lung cancer is crucial for effective treatment and relies on accurate volumetric assessment of pulmonary nodules in CT scans. Traditional methods, such as consolidation-to-tumor ratio (CTR) and spherical approximation,…

Image and Video Processing · Electrical Eng. & Systems 2025-08-29 Yihan Zhou , Haocheng Huang , Yue Yu , Jianhui Shang

We propose an algorithm for electrocardiogram (ECG) segmentation using a UNet-like full-convolutional neural network. The algorithm receives an arbitrary sampling rate ECG signal as an input, and gives a list of onsets and offsets of P and…

Signal Processing · Electrical Eng. & Systems 2020-01-15 Viktor Moskalenko , Nikolai Zolotykh , Grigory Osipov