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Efficiently retrieving an enormous chemical library to design targeted molecules is crucial for accelerating drug discovery, organic chemistry, and optoelectronic materials. Despite the emergence of generative models to produce novel…

Computational Engineering, Finance, and Science · Computer Science 2024-09-13 Zijun Chen , Yu Wang , Liuzhenghao Lv , Hao Li , Zongying Lin , Li Yuan , Yonghong Tian

The widespread adoption of large language models (LLMs) has made it difficult to distinguish human writing from machine-produced text in many real applications. Detectors that were effective for one generation of models tend to degrade when…

Computation and Language · Computer Science 2025-12-09 Sepyan Purnama Kristanto , Lutfi Hakim , Dianni Yusuf

Segmentation is essential for medical image analysis tasks such as intervention planning, therapy guidance, diagnosis, treatment decisions. Deep learning is becoming increasingly prominent for segmentation, where the lack of annotations,…

Computer Vision and Pattern Recognition · Computer Science 2019-03-19 Firat Ozdemir , Zixuan Peng , Christine Tanner , Philipp Fuernstahl , Orcun Goksel

We develop a novel hybrid method for Bayesian network structure learning called partitioned hybrid greedy search (pHGS), composed of three distinct yet compatible new algorithms: Partitioned PC (pPC) accelerates skeleton learning via a…

Machine Learning · Statistics 2021-03-24 Jireh Huang , Qing Zhou

Training modern neural networks or models typically requires averaging over a sample of high-dimensional vectors. Poisoning attacks can skew or bias the average vectors used to train the model, forcing the model to learn specific patterns…

Cryptography and Security · Computer Science 2024-12-17 Sarthak Choudhary , Aashish Kolluri , Prateek Saxena

Machine learning has become an appealing signature-less approach to detect and classify malware because of its ability to generalize to never-before-seen samples and to handle large volumes of data. While traditional feature-based…

Cryptography and Security · Computer Science 2024-04-30 Daniel Gibert , Carles Mateu , Jordi Planes , Quan Le

Deep segmentation models often face the failure risks when the testing image presents unseen distributions. Improving model robustness against these risks is crucial for the large-scale clinical application of deep models. In this study,…

Computer Vision and Pattern Recognition · Computer Science 2022-07-04 Yuhao Huang , Xin Yang , Xiaoqiong Huang , Jiamin Liang , Xinrui Zhou , Cheng Chen , Haoran Dou , Xindi Hu , Yan Cao , Dong Ni

In this research, we compare malware detection techniques based on static, dynamic, and hybrid analysis. Specifically, we train Hidden Markov Models (HMMs ) on both static and dynamic feature sets and compare the resulting detection rates…

Cryptography and Security · Computer Science 2022-03-21 Anusha Damodaran , Fabio Di Troia , Visaggio Aaron Corrado , Thomas H. Austin , Mark Stamp

The idea of using fragment embedding to circumvent the high computational scaling of accurate electronic structure methods while retaining high accuracy has been a long-standing goal for quantum chemists. Traditional fragment embedding…

Chemical Physics · Physics 2022-10-11 Hong-Zhou Ye , Matthew Welborn , Nathan D. Ricke , Troy Van Voorhis

Computing an optimal chain of fragments is a classical problem in string algorithms, with important applications in computational biology. There exist two efficient dynamic programming algorithms solving this problem, based on different…

Data Structures and Algorithms · Computer Science 2015-06-25 Julien Allali , Laetitia Bourgeade , Cedric Chauve

A novel framework for designing the molecular structure of chemical compounds with a desired chemical property has recently been proposed. The framework infers a desired chemical graph by solving a mixed integer linear program (MILP) that…

Computational Engineering, Finance, and Science · Computer Science 2023-05-02 Jianshen Zhu , Naveed Ahmed Azam , Kazuya Haraguchi , Liang Zhao , Hiroshi Nagamochi , Tatsuya Akutsu

In the majority of molecular optimization tasks, predictive machine learning (ML) models are limited due to the unavailability and cost of generating big experimental datasets on the specific task. To circumvent this limitation, ML models…

Due to its open-source nature, the Android operating system has consistently been a primary target for attackers. Learning-based methods have made significant progress in the field of Android malware detection. However, traditional…

Cryptography and Security · Computer Science 2025-04-11 Xingyuan Wei , Zijun Cheng , Ning Li , Qiujian Lv , Ziyang Yu , Degang Sun

Computer-aided molecular design (CAMD) studies quantitative structure-property relationships and discovers desired molecules using optimization algorithms. With the emergence of machine learning models, CAMD score functions may be replaced…

Computational Engineering, Finance, and Science · Computer Science 2023-12-07 Shiqiang Zhang , Juan S. Campos , Christian Feldmann , Frederik Sandfort , Miriam Mathea , Ruth Misener

Traditional permutation schemes mostly focus on random scrambling of pixels, often neglecting the intrinsic image information that could enhance diffusion in image encryption algorithms. This paper introduces PermutEx, a…

Cryptography and Security · Computer Science 2023-11-07 Muhammad Shahbaz Khan , Jawad Ahmad , Ahmed Al-Dubai , Zakwan Jaroucheh , Nikolaos Pitropakis , William J. Buchanan

Recent advances in generative deep learning have transformed small molecule design, but most methods lack biological systems context, focusing narrowly on specific protein pockets. We introduce a non-differentiable diffusion guidance method…

Biomolecules · Quantitative Biology 2024-10-15 Vincent D. Zaballa , Elliot E. Hui

Motivation: Modelling methods that find structure in data are necessary with the current large volumes of genomic data, and there have been various efforts to find subsets of genes exhibiting consistent patterns over subsets of treatments.…

Machine Learning · Computer Science 2016-09-15 Kerstin Bunte , Eemeli Leppäaho , Inka Saarinen , Samuel Kaski

Automatic image segmentation becomes very crucial for tumor detection in medical image processing.In general, manual and semi automatic segmentation techniques require more time and knowledge. However these drawbacks had overcome by…

Computer Vision and Pattern Recognition · Computer Science 2016-03-09 D. Anithadevi , K. Perumal

Accurate medical image segmentation commonly requires effective learning of the complementary information from multimodal data. However, in clinical practice, we often encounter the problem of missing imaging modalities. We tackle this…

Computer Vision and Pattern Recognition · Computer Science 2020-02-25 Cheng Chen , Qi Dou , Yueming Jin , Hao Chen , Jing Qin , Pheng-Ann Heng

Hex is a complex game with a high branching factor. For the first time Hex is being attempted to be solved without the use of game tree structures and associated methods of pruning. We also are abstaining from any heuristic information…

Machine Learning · Computer Science 2020-08-17 Debangshu Banerjee