English
Related papers

Related papers: Interaction Mechanisms Quantified from Dynamical F…

200 papers

Even the simplest of animals exhibit behavioral sequences with complex temporal dynamics. Prominent amongst the proposed organizing principles for these dynamics has been the idea of a hierarchy, wherein the movements an animal makes can be…

Biological Physics · Physics 2017-02-08 Gordon J. Berman , William Bialek , Joshua W. Shaevitz

Reductions in natural habitats urge that we better understand species' interconnection and how biological communities respond to environmental changes. However, ecological studies of species' interactions are limited by their geographic and…

Methodology · Statistics 2023-02-21 Georgia Papadogeorgou , Carolina Bello , Otso Ovaskainen , David B. Dunson

We formulate a mathematical model for daily activities of a cow (eating, lying down, and standing) in terms of a piecewise affine dynamical system. We analyze the properties of this bovine dynamical system representing the single animal and…

Adaptation and Self-Organizing Systems · Physics 2015-05-18 Jie Sun , Erik M. Bollt , Mason A. Porter , Marian S. Dawkins

Several models of flocking have been promoted based on simulations with qualitatively naturalistic behavior. In this paper we provide the first direct application of computational modeling methods to infer flocking behavior from…

Other Quantitative Biology · Quantitative Biology 2015-05-30 Graciano Dieck Kattas , Xiao-Ke Xu , Michael Small

Animals typically forage in groups. Social foraging can help animals avoid predation and decrease their uncertainty about the richness of food resources. Despite this, theoretical mechanistic models of patch foraging have overwhelmingly…

Populations and Evolution · Quantitative Biology 2022-02-14 Subekshya Bidari , Ahmed El Hady , Jacob Davidson , Zachary P Kilpatrick

For decades, robotics researchers have pursued various tasks for multi-robot systems, from cooperative manipulation to search and rescue. These tasks are multi-robot extensions of classical robotic tasks and often optimized on dimensions…

This review examines the evidence in the literature for physiological co-modulation during human-animal interaction. The aim of this work is to identify studies that assessed co-modulation via simultaneous measurement of physiological…

Neurons and Cognition · Quantitative Biology 2025-10-14 G. Bargigli , L. Frassineti , A. Lanata' , P. Baragli , C. Scopa , A. Vignoli

Collective motion of bird flocks can be explained via the hypothesis of many wrongs, and/or, a structured leadership mechanism. In pigeons, previous studies have shown that there is a well-defined hierarchical structure and certain specific…

Physics and Society · Physics 2015-06-03 Xiao-Ke Xu , Graciano Dieck Kattas , Michael Small

We present a general framework for modeling a wide selection of flocking scenarios under free boundary conditions. Several variants have been considered - including examples for the widely observed behavior of hierarchically interacting…

Physics and Society · Physics 2019-04-23 Yongnan Jia , Tamas Vicsek

Social interactions are fundamental in animal groups, including humans, and can take various forms, such as competition, cooperation, or kinship. Understanding these interactions in marine environments has been historically challenging due…

Quantitative Methods · Quantitative Biology 2025-10-22 Juan Fernández-Gracia , Jorge P. Rodríguez , Lauren R. Peel , Konstantin Klemm , Mark G. Meekan , Víctor M. Eguíluz

We consider the interacting particle system on the homogeneous tree of degree $(d + 1)$, known as frog model. In this model, active particles perform independent random walks, awakening all sleeping particles they encounter, and dying after…

Probability · Mathematics 2019-12-09 Elcio Lebensztayn , Jaime Utria

One non-invasive way to study frog communities is by analyzing long-term samples of acoustic material containing calls. This immense task has been optimized by the development of Machine Learning tools to extract ecological information. We…

Interactions among individuals from the same-species of wild animals are an important component of population dynamics. An interaction can be either static (based on overlap of space use) or dynamic (based on movement). The goal of this…

Applications · Statistics 2025-02-05 Fekadu L. Bayisa , Christopher L. Seals , Hannah J. Leeper , Todd D. Steury , Elvan Ceyhan

We propose a new model in order to study behaviors of self-organized system such as a group of animals. We assume that the individuals have two degrees of freedom corresponding one to their internal state and the other to their external…

Biological Physics · Physics 2015-10-23 P. The Nguyen , V. Thanh Ngo , H. T. Diep

In swarms of flying insects, the motions of individuals are largely uncoordinated with those of their neighbors, unlike the highly ordered motion of bird flocks. However, it has been observed that insects may transiently form pairs with…

Sound is assumed to be the primary modality of communication among marine mammal species. Analyzing acoustic recordings helps to understand the function of the acoustic signals as well as the possible impact of anthropogenic noise on…

We study a system of simple random walks on graphs, known as frog model. This model can be described as follows: There are active and sleeping particles living on some graph G. Each active particle performs a simple random walk with…

Probability · Mathematics 2019-03-05 O. S. M. Alves , F. P. Machado , S. Yu. Popov

The human vocal folds are known to interact with the vocal tract acoustics during voiced speech production; namely a nonlinear source-filter coupling has been observed both by using models and in \emph{in vivo} phonation. These phenomena…

Biological Physics · Physics 2015-11-17 Daniel Aalto , Jarmo Malinen , Martti Vainio

Common models of synchronizable oscillatory systems consist of a collection of coupled oscillators governed by a collection of differential equations. The ubiquitous Kuramoto models rely on an {\em a priori} fixed connectivity pattern…

Populations and Evolution · Quantitative Biology 2020-05-01 Elizabeth A. Tripp , Feng Fu , Scott D. Pauls

We perform a numerical analysis of a recent introduced model for describing collective movement in alarmed animals groups. This model, derived from a position-based interaction and a limited attention field, displays a non-equilibrium phase…

Biological Physics · Physics 2019-03-08 A. M. Calvão , E. Brigatti