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The remarkable performance of the Transformer architecture in natural language processing has recently also triggered broad interest in Computer Vision. Among other merits, Transformers are witnessed as capable of learning long-range…

Computer Vision and Pattern Recognition · Computer Science 2023-11-07 Reza Azad , Amirhossein Kazerouni , Moein Heidari , Ehsan Khodapanah Aghdam , Amirali Molaei , Yiwei Jia , Abin Jose , Rijo Roy , Dorit Merhof

A novel approach to 3D surface imaging is proposed, allowing for the continuous sampling of 3D surfaces to extract localized perspective transformation coefficients from Fourier spectrum analysis of projected patterns. The mathematical…

Signal Processing · Electrical Eng. & Systems 2022-11-29 Ian J. Maquignaz

It is well-known in image processing that computational cost increases rapidly with the number and dimensions of the images to be processed. Several fields, such as medical imaging, routinely use numerous very large images, which might also…

Computer Vision and Pattern Recognition · Computer Science 2016-05-24 Fares Al-Qunaieer , Hamid R. Tizhoosh , Shahryar Rahnamayan

Automated in-vitro cell detection and counting have been a key theme for artificial and intelligent biological analysis such as biopsy, drug analysis and decease diagnosis. Along with the rapid development of microfluidics and lab-on-chip…

Computer Vision and Pattern Recognition · Computer Science 2020-01-08 Tiancheng Xia , Richard Jiang , YongQing Fu , Nanlin Jin

Microscopy, in particular scanning probe and electron microscopy, has been pivotal in improving our understanding of structure-function relationships at the nanoscale and is by now ubiquitous in most research characterization labs and…

This paper describes AutoFocus, an efficient multi-scale inference algorithm for deep-learning based object detectors. Instead of processing an entire image pyramid, AutoFocus adopts a coarse to fine approach and only processes regions…

Computer Vision and Pattern Recognition · Computer Science 2019-08-02 Mahyar Najibi , Bharat Singh , Larry S. Davis

Deep learning algorithms offer a powerful means to automatically analyze the content of medical images. However, many biological samples of interest are primarily transparent to visible light and contain features that are difficult to…

Computer Vision and Pattern Recognition · Computer Science 2017-09-22 Roarke Horstmeyer , Richard Y. Chen , Barbara Kappes , Benjamin Judkewitz

One primary technical challenge in photoacoustic microscopy (PAM) is the necessary compromise between spatial resolution and imaging speed. In this study, we propose a novel application of deep learning principles to reconstruct…

Image and Video Processing · Electrical Eng. & Systems 2020-06-02 Anthony DiSpirito , Daiwei Li , Tri Vu , Maomao Chen , Dong Zhang , Jianwen Luo , Roarke Horstmeyer , Junjie Yao

This paper proposes a new technique based on nonlinear Adaptive Median filter (AMF) for image restoration. Image denoising is a common procedure in digital image processing aiming at the removal of noise, which may corrupt an image during…

Computer Vision and Pattern Recognition · Computer Science 2010-04-28 T. K. Thivakaran , RM. Chandrasekaran

The rise of electron microscopy has expanded our ability to acquire nanometer and atomically resolved images of complex materials. The resulting vast datasets are typically analyzed by human operators, an intrinsically challenging process…

Materials Science · Physics 2024-05-07 Kamyar Barakati , Hui Yuan , Amit Goyal , Sergei V. Kalinin

Applications such as Magnetic Resonance Tomography acquire imaging data by point samples of their Fourier transform. This raises the question of balancing the efficiency of the sampling strategies with the approximation accuracy of an…

Numerical Analysis · Mathematics 2015-10-20 Gitta Kutyniok , Wang-Q Lim

We present a semi-blind, spatially-variant deconvolution technique aimed at optical microscopy that combines a local estimation step of the point spread function (PSF) and deconvolution using a spatially variant, regularized Richardson-Lucy…

Computer Vision and Pattern Recognition · Computer Science 2019-05-21 Adrian Shajkofci , Michael Liebling

We present a structured-illumination technique for full-field super-resolution transmission X-ray microscopy, which employs Fourier spectral decomposition inspired by established methods in visible-light microscopy. A 2D grating creating…

In this paper, we present an automatic system for the analysis and labeling of structural scenes, floor plan drawings in Computer-aided Design (CAD) format. The proposed system applies a fusion strategy to detect and recognize various…

Graphics · Computer Science 2018-02-07 Rui Tang , Yuhan Wang , Darren Cosker , Wenbin Li

Purpose: Microsurgical Aneurysm Clipping Surgery (MACS) carries a high risk for intraoperative aneurysm rupture. Automated recognition of instances when the aneurysm is exposed in the surgical video would be a valuable reference point for…

Computer Vision and Pattern Recognition · Computer Science 2023-03-20 Jinfan Zhou , William Muirhead , Simon C. Williams , Danail Stoyanov , Hani J. Marcus , Evangelos B. Mazomenos

Atomic force microscopy (AFM) is a key tool for characterising nanoscale structures, with functionalised tips now offering detailed images of the atomic structure. In parallel, AFM simulations using the particle probe model provide a…

Materials Science · Physics 2025-09-03 Jie Huang , Niko Oinonen , Fabio Priante , Filippo Federici Canova , Lauri Kurki , Chen Xu , Adam S. Foster

Fluorescence microscopy is essential to study biological structures and dynamics. However, existing systems suffer from a tradeoff between field-of-view (FOV), resolution, and complexity, and thus cannot fulfill the emerging need of…

Optics · Physics 2022-09-09 Yujia Xue , Qianwan Yang , Guorong Hu , Kehan Guo , Lei Tian

Scanning transmission electron microscopy (STEM) is now the primary tool for exploring functional materials on the atomic level. Often, features of interest are highly localized in specific regions in the material, such as ferroelectric…

Materials Science · Physics 2021-08-11 Nicole Creange , Ondrej Dyck , Rama K. Vasudevan , Maxim Ziatdinov , Sergei V. Kalinin

In machine learning, research has traditionally focused on model development, with relatively less attention paid to training data. As model architectures have matured and marginal gains from further refinements diminish, data quality has…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Pei-Han Chen , Szu-Chi Chung

Experimentally acquired microscopy images are unavoidably affected by the presence of noise and other unwanted signals, which degrade their quality and might hide relevant features. With the recent increase in image acquisition rate, modern…

Image and Video Processing · Electrical Eng. & Systems 2025-05-15 Marco Corrias , Giada Franceschi , Michele Riva , Alberto Tampieri , Karin Föttinger , Ulrike Diebold , Thomas Pock , Cesare Franchini