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This document contains the mathematical introduction to RORPack - a Python software library for robust output tracking and disturbance rejection for linear PDE systems. The RORPack library is open-source and freely available at…

Optimization and Control · Mathematics 2019-02-27 Lassi Paunonen

We present a newly developed software package which implements a wide range of routines frequently used in Weak Gravitational Lensing (WL). With the continuously increasing size of the WL scientific community we feel that easy to use…

Cosmology and Nongalactic Astrophysics · Physics 2016-11-18 Andrea Petri

Qhronology is a novel scientific-computing package for studying quantum models of closed timelike curves (CTCs) and simulating general quantum information processing and computation. Written in Python, the program provides a comprehensive…

Quantum Physics · Physics 2026-04-15 Lachlan G. Bishop

Trapped-ion quantum simulators have demonstrated a long history of studying the physics of interacting spin-lattice systems using globally addressed entangling operations. Here, we seek to broaden and delimit the classes of effective…

Quantum Physics · Physics 2024-04-16 Antonis Kyprianidis , A. J. Rasmusson , Philip Richerme

Gauge field theories play a central role in modern physics and are at the heart of the Standard Model of elementary particles and interactions. Despite significant progress in applying classical computational techniques to simulate gauge…

Quantum Physics · Physics 2020-04-15 Zohreh Davoudi , Mohammad Hafezi , Christopher Monroe , Guido Pagano , Alireza Seif , Andrew Shaw

relentless is an open-source Python package that enables the optimization of objective functions computed using molecular dynamics simulations. It has a high-level, extensible interface for model parametrization; setting up, running, and…

Soft Condensed Matter · Physics 2024-08-07 Adithya N Sreenivasan , C. Levi Petix , Zachary M. Sherman , Michael P. Howard

We propose to use a large cloud of cold trapped ions as a medium for quantum optics and quantum information experiments. Contrary to most recent realizations of qubit manipulation based on a small number of trapped and cooled ions, we study…

Quantum Physics · Physics 2016-08-16 Thomas Coudreau , Frédéric Grosshans , Samuel Guibal , Luca Guidoni

A software tool, computing observed and expected upper limits on Poissonian process rates using a hybrid frequentist-Bayesian CLs method, is presented. This tool can be used for simple counting experiments where only signal, background and…

High Energy Physics - Experiment · Physics 2018-03-26 Emmanuel Busato , David Calvet , Timothée Theveneaux-Pelzer

PyECLOUD is a newly developed code for the simulation of the electron cloud (EC) build-up in particle accelerators. Almost entirely written in Python, it is mostly based on the physical models already used in the ECLOUD code but, thanks to…

Accelerator Physics · Physics 2013-09-27 G. Iadarola , G. Rumolo

Particle suspensions are ubiquitous in our daily life, but are not well understood due to their complexity. During the last twenty years, various simulation methods have been developed in order to model these systems. Due to varying…

Soft Condensed Matter · Physics 2011-03-16 Jens Harting , Martin Hecht , Hans J. Herrmann , Sean McNamara

The package performs molecular-dynamics-like agent-based simulations for models of aligning self-propelled particles in two dimensions such as e.g. the seminal Vicsek model or variants of it. In one class of the covered models, the…

Computational Physics · Physics 2023-05-31 Rüdiger Kürsten

We present an optical scheme to detect the oscillations of a two-ion string confined in a linear Paul trap. The motion is detected by analyzing the intensity correlations in the fluorescence light emitted by one or two ions in the string.…

Quantum Physics · Physics 2021-09-28 G. Cerchiari , G. Araneda , L. Podhora , L. Slodička , Y. Colombe , R. Blatt

Dynamic simulators are computational models governed by differential equations that evolve over time. They are essential for scientific and engineering applications but remain challenging to emulate because of the unpredictable behavior of…

Computation · Statistics 2025-08-12 Junoh Heo

Trapped-ion quantum information processors store information in atomic ions maintained in position in free space via electric fields. Quantum logic is enacted via manipulation of the ions' internal and shared motional quantum states using…

Quantum Physics · Physics 2020-09-04 Kenneth R. Brown , John Chiaverini , Jeremy Sage , Hartmut Häffner

Dense suspensions are widespread in nature, manufacturing and process engineering. Particle-based simulations have proven to be an invaluable complement to experimental rheological characterisation, serving as a virtual rheometer that…

Soft Condensed Matter · Physics 2022-12-20 Christopher Ness

Simulating the dynamics of ions near polarizable nanoparticles (NPs) using coarse-grained models is extremely challenging due to the need to solve the Poisson equation at every simulation timestep. Recently, a molecular dynamics (MD) method…

Computational Physics · Physics 2019-11-01 JCS Kadupitiya , Geoffrey C. Fox , Vikram Jadhao

Recent developments in many-body potential energy representation via deep learning have brought new hopes to addressing the accuracy-versus-efficiency dilemma in molecular simulations. Here we describe DeePMD-kit, a package written in…

Computational Physics · Physics 2018-05-23 Han Wang , Linfeng Zhang , Jiequn Han , Weinan E

The classical approximation may be applied to a number of problems in non-equilibrium field theory. The principles and limits of classical real-time lattice simulations are presented, with particular emphasis on the definition of particle…

High Energy Physics - Lattice · Physics 2009-11-10 Jon-Ivar Skullerud

Linear kinetic Monte Carlo particle transport models are frequently employed in fusion plasma simulations to quantify atomic and surface effects on the main plasma flow dynamics. Separate codes are used for transport of neutral particles…

Plasma Physics · Physics 2015-06-03 J. Seebacher , A. Kendl

Characterizing the temporal variability of astrophysical sources is key to understanding the underlying physical processes driving their emissions. This work introduces a gammapy_SyLC, a Python package that offers tools to simulate and fit…

High Energy Astrophysical Phenomena · Physics 2025-03-19 Claudio Galelli