English
Related papers

Related papers: Stay hydrated: Basolateral fluids shaping tissues

200 papers

We investigate cell trajectories during zebrafish early embryogenesis based on 3D+time photonic microscopy imaging data. To remove the collective flow motion and focus on fluctuations, we analyze the deviations of pairs of neighboring…

Biological Physics · Physics 2019-11-13 Juan Raphael Diaz Simoes , Denis Grebenkov , Paul Bourgine , Nadine Peyriéras

We derive a mathematical model for the motion of several insulating rigid bodies through an electrically conducting fluid. Starting from a universal model describing this phenomenon in generality, we elaborate (simplifying) physical…

Mathematical Physics · Physics 2024-02-13 Jan Scherz , Anja Schlömerkemper

A great number of biological organisms live in aqueous environments. Major evolutionary transitions, including the emergence of life itself, likely occurred in such environments. While the chemical aspects of the role of water in biology…

Populations and Evolution · Quantitative Biology 2020-07-01 Madison S. Krieger , Sam Sinai , Martin A. Nowak

Topologically nontrivial field configurations called "baby skyrmions" behave like particles and give origins to the field of skyrmionics that promises racetrack memory and other technological applications. Unraveling the non-equilibrium…

Materials Science · Physics 2017-06-30 Paul J. Ackerman , Timothy Boyle , Ivan I. Smalyukh

We use a theoretical approach to examine the effect of a radial fluid flow or electric current on the growth and homeostasis of a cell spheroid. Such conditions may be generated by a drain of micrometric diameter. To perform this analysis,…

Biological Physics · Physics 2021-05-27 Charlie Duclut , Jacques Prost , Frank Jülicher

Lipid bilayer membranes have a native (albeit small) permeability for water molecules. Under an external load, provided that the bilayer structure stays intact and does not suffer from poration or rupture, a lipid membrane deforms and its…

Soft Condensed Matter · Physics 2021-07-14 Bryan Quaife , Ashley Gannon , Y. -N. Young

The blastocoel is a fluid-filled cavity characteristic of animal embryos at the blastula stage. Its emergence is commonly described as the result of cleavage patterning, but this historical view conceals a large diversity of mechanisms and…

Cell Behavior · Quantitative Biology 2021-10-12 Mathieu Le-Verge-Serandour , Hervé Turlier

Mesozooplankton aggregations undergoing vertical migrations in the upper ocean have been hypothesized to have an important role in the redistribution of carbon, nutrients, and oxygen via biogenic hydrodynamic transport (BHT). While…

Fluid Dynamics · Physics 2026-03-04 Yunxing Su , Rui Zhu , Eckart Meiburg , Monica M. Wilhelmus

Despite their significance in biology and materials science, the dynamics of multicomponent vesicles under shear flow remain poorly understood because of their nonlinear and strongly coupled nature, especially regarding the role of membrane…

Soft Condensed Matter · Physics 2025-09-11 Shuqi Tang , Steven M. Wise , John Lowengrub , Zhenlin Guo

Cell migration is important in many biological processes, including embryonic development, cancer metastasis, and wound healing. In these tissues, a cell's motion is often strongly constrained by its neighbors, leading to glassy dynamics.…

Biological Physics · Physics 2016-01-20 Dapeng Bi , J. H. Lopez , J. M. Schwarz , M. Lisa Manning

Structure of polymer electrolytes membranes, e.g., Nafion, inside fuel cell catalyst layers has significant impact on the electrochemical activity and transport phenomena that determine cell performance. In those regions, Nafion can be…

Soft Condensed Matter · Physics 2013-10-03 D. Damasceno Borges , A. A. Franco , K. Malek , G. Gebel , S. Mossa

In biological tissues, it is now well-understood that mechanical cues are a powerful mechanism for pattern regulation. While much work has focused on interactions between cells and external substrates, recent experiments suggest that cell…

Soft Condensed Matter · Physics 2017-11-01 Michael Czajkowski , Dapeng Bi , M. Lisa Manning , M. Cristina Marchetti

We investigate the hydrodynamic stability and the formation of patterns in a continuum model of epithelial layers, able to account for the interplay between mechanical activity, lateral adhesion and the $6-$fold orientational order…

Soft Condensed Matter · Physics 2025-02-19 Josep-Maria Armengol-Collado , Leonardo Puggioni , Livio N. Carenza , Luca Giomi

The formation of a body-axis is central to animal development and involves both polarity and morphology. While polarity is traditionally associated with biochemical patterning, the morphological aspect of axis formation remains elusive. In…

Biological Physics · Physics 2025-12-22 Oded Agam , Erez Braun

We study a physical model for the formation of bud-like invaginations on fluid membranes under tension, and apply this model to caveolae formation. We demonstrate that budding can be driven by membrane-bound inclusions (proteins) provided…

Soft Condensed Matter · Physics 2009-11-10 P. Sens , M. S. Turner

Spatiotemporal patterns in multicellular systems are important to understanding tissue dynamics, for instance, during embryonic development and disease. Here, we use a multiphase field model to study numerically the behavior of a…

Soft Condensed Matter · Physics 2025-02-13 Michael Chiang , Austin Hopkins , Benjamin Loewe , M. Cristina Marchetti , Davide Marenduzzo

We introduce an in silico model for the initial spread of an aberrant phenotype with Warburg-like overflow metabolism within a healthy homeostatic tissue in contact with a nutrient reservoir (the blood), aimed at characterizing the role of…

Molecular Networks · Quantitative Biology 2017-06-09 Jorge Fernandez-de-Cossio-Diaz , Andrea De Martino , Roberto Mulet

Fluid pumping and the generation of electric current by living tissues are required during morphogenetic processes and for maintainance of homeostasis. How these flows emerge from active and passive ion transport in cells has been well…

Biological Physics · Physics 2022-11-15 Marko Popović , Jacques Prost , Frank Jülicher

Cell motion inside dense tissues governs many biological processes, including embryonic development and cancer metastasis, and recent experiments suggest that these tissues exhibit collective glassy behavior. To make quantitative…

Biological Physics · Physics 2016-04-27 Dapeng Bi , Xingbo Yang , M. Cristina Marchetti , M. Lisa Manning

Droplet formation has emerged as an essential concept for the spatiotemporal organisation of biomolecules in cells. However, classical descriptions of droplet dynamics based on passive liquid-liquid phase separation cannot capture the…

Biological Physics · Physics 2025-11-14 David Zwicker , Oliver W. Paulin , Cathelijne ter Burg