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Related papers: Lipid Bilayer Hydrodynamic Drag

200 papers

Numerical simulations of vesicle suspensions are performed in two dimensions to study their dynamical and rheological properties. An hybrid method is adopted, which combines a mesoscopic approach for the solvent with a curvature-elasticity…

Soft Condensed Matter · Physics 2015-06-18 A. Lamura , G. Gompper

The red blood cell (RBC) membrane is composed of a lipid bilayer and a cytoskeleton interconnected by protein junction complexes, allowing for potential sliding between the lipid bilayer and the cytoskeleton. Despite this biological…

Fluid Dynamics · Physics 2024-01-23 V. Puthumana , P. G. Chen , M. Leonetti , R. Lasserre , M. Jaeger

We present a simple, and physically motivated, coarse-grained model of a lipid bilayer, suited for micron scale computer simulations. Each ~25 nm^2 patch of bilayer is represented by a spherical particle. Mimicking forces of hydrophobic…

Soft Condensed Matter · Physics 2015-05-13 Andrea Pasqua , Lutz Maibaum , George Oster , Daniel A. Fletcher , Phillip L. Geissler

Explicit analytical expressions for the drag and diffusion coefficients of a spherical particle attached to the interface between two immiscible fluids are constructed for the case of a small viscosity ratio between the fluid phases. The…

Soft Condensed Matter · Physics 2016-04-20 Aaron Dörr , Steffen Hardt

We present a simple and computationally efficient coarse-grained and solvent-free model for simulating lipid bilayer membranes. In order to be used in concert with particle-based reaction-diffusion simulations, the model is purely based on…

Biological Physics · Physics 2018-01-31 Mohsen Sadeghi , Thomas R. Weikl , Frank Noé

Lipid membranes regulate the flow of materials and information between cells and their organelles. Further, lipid composition and morphology can play a key role in regulating a variety of biological processes. For example, viral uptake,…

Biomolecules · Quantitative Biology 2009-05-12 Tristan Ursell , Rob Phillips

We study the local dynamics of a thixotropic yield stress fluid that shows a pronounced non-monotonic flow curve. This mechanically unstable behavior is generally not observable from standard rheometry tests, resulting in a stress plateau…

Soft Condensed Matter · Physics 2024-11-04 Michela Geri , Brice Saint-Michel , Thibaut Divoux , Gareth H. McKinley , Sebastien Manneville

The adhesion of a lipid membrane vesicle to a fixed substrate is examined from a geometrical point of view. This vesicle is described by the Helfrich hamiltonian quadratic in mean curvature; it interacts by contact with the substrate, with…

Soft Condensed Matter · Physics 2009-11-07 Riccardo Capovilla , Jemal Guven

The behavior of lipid bilayer is important to understand the functionality of cells like the trafficking of ions between cells. Standard procedures to explore the properties of lipid bilayer and hemifused states typically use either…

Soft Condensed Matter · Physics 2014-10-14 Jose Nabor Vargas , Ralf Seemann , Jean-Baptiste Fleury

We review recent computer simulation studies of undulating lipid bilayers. Theoretical interpretations of such fluctuating membranes are most commonly based on generalized Helfrich-type elastic models, with additional contributions of local…

Biological Physics · Physics 2013-09-03 Friederike Schmid

We study the steady flow properties of different three-dimensional aqueous foams in a wide gap Couette geometry. From local velocity measurements through Magnetic Resonance Imaging techniques and from viscosity bifurcation experiments, we…

Soft Condensed Matter · Physics 2011-05-04 Guillaume Ovarlez , Kapil Krishan , Sylvie Cohen-Addad

The effect of various velocity boundary condition is studied in two-dimensional Rayleigh-B\'enard convection. Combinations of no-slip, stress-free and periodic boundary conditions are used on both the sidewalls and the horizontal plates.…

Fluid Dynamics · Physics 2015-01-09 Erwin P. van der Poel , Rodolfo Ostilla Mónico , Roberto Verzicco , Detlef Lohse

We report on the modeling of the dynamics of confined lipid membranes. We derive a thin film model in the lubrication limit which describes an inextensible liquid membrane with bending rigidity confined between two adhesive walls. The…

Soft Condensed Matter · Physics 2018-08-02 Tung B. T. To , Thomas Le Goff , Olivier Pierre-Louis

Understanding what happens inside the rippling and dancing surface of a liquid remains one of the great challenges of fluid dynamics. Using molecular dynamics (MD) we can pick apart the interface structure and understand surface tension. In…

Computational Physics · Physics 2020-10-28 Edward R. Smith , Carlos Braga

We examine the budding of a nanoscale particle through a lipid bilayer using molecular dynamics simulations, free energy calculations, and an elastic theory, with the aim of determining the extent to which equilibrium elasticity theory can…

Subcellular Processes · Quantitative Biology 2012-02-22 Teresa Ruiz-Herrero , Enrique Velasco , Michael F. Hagan

The dynamic shape relaxation of the two-layer-vesicle is calculated. In additional to the undulation relaxation where the two bilayers move in the same direction, the squeezing mode appears when the gap between the two bilayers is small. At…

Soft Condensed Matter · Physics 2015-06-11 C. -Y. David Lu , Shigeyuki Komura , Kazuhiko Seki

We have performed molecular dynamics simulations of solid-solid contacts lubricated by a model fluid displaying many of the properties of water, particularly its expansive freezing. Near the region where expansive freezing occurs, the…

Condensed Matter · Physics 2009-11-07 E. A. Jagla

A numerical and systematic parameter study of three-dimensional vesicle electrohydrodynamics is presented to investigate the effects of different fluid and membrane properties. The dynamics of vesicles in the presence of DC electric fields…

Soft Condensed Matter · Physics 2016-05-24 Ebrahim M. Kolahdouz , David Salac

The biological function of membranes is closely related to their softness, which is often studied through the membranes' thermally-driven fluctuations. The analysis commonly assumes that the relaxation rate of a pure bending deformation is…

Soft Condensed Matter · Physics 2024-07-09 Hammad A. Faizi , Rony Granek , Petia M. Vlahovska

The outstanding lubrication of articular cartilage in the major synovial joints such as hips and knees, essential for the joint well-being, has been attributed to boundary layers of lipids at the outer cartilage surfaces, which have very…

Soft Condensed Matter · Physics 2024-04-10 Di Jin , Jacob Klein