English
Related papers

Related papers: Integrated Nested Laplace Approximations (INLA)

200 papers

Bayesian inference on non-Gaussian data is often non-analytic and requires computationally expensive approximations such as sampling or variational inference. We propose an approximate inference framework primarily designed to be…

Machine Learning · Computer Science 2022-10-12 Marius Hobbhahn , Philipp Hennig

In a bivariate meta-analysis the number of diagnostic studies involved is often very low so that frequentist methods may result in problems. Bayesian inference is attractive as informative priors that add small amount of information can…

Methodology · Statistics 2015-12-22 Jingyi Guo , Håvard Rue , Andrea Riebler

Current implementations of multiresolution methods are limited in terms of possible types of responses and approaches to inference. We provide a multiresolution approach for spatial analysis of non-Gaussian responses using latent Gaussian…

Methodology · Statistics 2020-05-27 John Paige , Geir-Arne Fuglstad , Andrea Riebler , Jon Wakefield

In this paper we describe fast Bayesian statistical analysis of vector positive-valued time series, with application to interesting financial data streams. We discuss a flexible level correlated model (LCM) framework for building…

Methodology · Statistics 2022-07-05 Chiranjit Dutta , Nalini Ravishanker , Sumanta Basu

Background: We aimed to design a Bayesian adaption trial through extensive simulations to determine values for key design parameters, demonstrate error rates, and establish the expected sample size. The complexity of the proposed outcome…

This paper introduces the R package INLAjoint, designed as a toolbox for fitting a diverse range of regression models addressing both longitudinal and survival outcomes. INLAjoint relies on the computational efficiency of the integrated…

Methodology · Statistics 2024-04-04 Denis Rustand , Janet van Niekerk , Elias Teixeira Krainski , Håvard Rue

Spatio-temporal Bayesian inference drives environmental and health sciences using latent Gaussian models. Integrated Nested Laplace Approximations (INLA) enable inference for these models at HPC scale but rely on derivative-based…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-08 Afif Boudaoud , Lisa Gaedke-Merzhäuser , Alexandros Nikolaos Ziogas , Vincent Maillou , Alexandru Calotoiu , Marcin Copik , Håvard Rue , Mathieu Luisier , Torsten Hoefler

Two-part joint models for a longitudinal semicontinuous biomarker and a terminal event have been recently introduced based on frequentist estimation. The biomarker distribution is decomposed into a probability of positive value and the…

Approximate Bayesian inference typically revolves around computing the posterior parameter distribution. In practice, however, the main object of interest is often a model's predictions rather than its parameters. In this work, we propose…

Machine Learning · Statistics 2026-05-29 Julian Rodemann , Alexander Marquard , Thomas Augustin , Michele Caprio

Aligning large language models (LLMs) to diverse human preferences is fundamentally challenging since criteria can often conflict with each other. Inference-time alignment methods have recently gained popularity as they allow LLMs to be…

Machine Learning · Statistics 2026-02-03 Shokichi Takakura , Akifumi Wachi , Rei Higuchi , Kohei Miyaguchi , Taiji Suzuki

Joint models have received increasing attention during recent years with extensions into various directions; numerous hazard functions, different association structures, linear and non-linear longitudinal trajectories amongst others. Many…

Methodology · Statistics 2019-01-29 Janet Van Niekerk , Haakon Bakka , Haavard Rue

We present a new technique for automatically inferring inductive invariants of parameterized distributed protocols specified in TLA+. Ours is the first such invariant inference technique to work directly on TLA+, an expressive, high level…

Logic in Computer Science · Computer Science 2022-10-04 William Schultz , Ian Dardik , Stavros Tripakis

These lecture notes aim at a post-Bachelor audience with a background at an introductory level in Applied Mathematics and Applied Statistics. They discuss the logic and methodology of the Bayes-Laplace approach to inductive statistical…

Applications · Statistics 2022-08-31 Henk van Elst

Bayesian methods and software for spatial data analysis are generally now well established in the scientific community. Despite the wide application of spatial models, the analysis of multivariate spatial data using R-INLA has not been…

The Laplace approximation has been one of the workhorses of Bayesian inference. It often delivers good approximations in practice despite the fact that it does not strictly take into account where the volume of posterior density lies.…

Machine Learning · Statistics 2022-03-02 Nikolaos Gianniotis

Due to the ease of modern data collection, applied statisticians often have access to a large set of covariates that they wish to relate to some observed outcome. Generalized linear models (GLMs) offer a particularly interpretable framework…

Computation · Statistics 2019-05-21 Brian L. Trippe , Jonathan H. Huggins , Raj Agrawal , Tamara Broderick

The INLAMSM package for the R programming language provides a collection of multivariate spatial models for lattice data that can be used with package INLA for Bayesian inference. The multivariate spatial models include different structures…

Modern methods for quantifying and predicting species distribution play a crucial part in biodiversity conservation. Occupancy models are a popular choice for analyzing species occurrence data as they allow to separate the observational…

Methodology · Statistics 2024-03-19 Jafet Belmont , Sara Martino , Janine Illian , Håvard Rue

In this paper we recast the problem of missing values in the covariates of a regression model as a latent Gaussian Markov random field (GMRF) model in a fully Bayesian framework. Our proposed approach is based on the definition of the…

Computation · Statistics 2019-12-24 Virgilio Gómez-Rubio , Michela Cameletti , Marta Blangiardo

Statistical analyses proceed by an iterative process of model fitting and checking. The R-INLA package facilitates this iteration by fitting many Bayesian models much faster than alternative MCMC approaches. As the interpretation of results…

Computation · Statistics 2020-04-07 Tim Lucas , Andre Python , David Redding