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The built environment provides an excellent setting for interdisciplinary research on the dynamics of microbial communities. The system is simplified compared to many natural settings, and to some extent the entire environment can be…

The role of activity on the hydrodynamic dispersion of bacteria in a model porous medium is studied by tracking thousands of bacteria in a microfluidic chip containing randomly placed pillars. We first evaluate the spreading dynamics of two…

Microbial communities routinely have several possible species compositions or community states observed for the same environmental parameters. Changes in these parameters can trigger abrupt and persistent transitions (regime shifts) between…

Populations and Evolution · Quantitative Biology 2019-07-03 Veronika Dubinkina , Yulia Fridman , Parth Pratim Pandey , Sergei Maslov

We studied the effects of surface composition and thermohaline mixing caused by secular instability on the accreting components for low--mass binaries and applied the results on a short-orbital-period BS F190 in the old cluster M67. The…

Astrophysics · Physics 2009-11-10 X. Chen , Z. Han

Ecology and evolution under changing environments are important in many subfields of biology with implications for medicine. Here, we explore an example: the consequences of fluctuating environments on the emergence of antibiotic…

Populations and Evolution · Quantitative Biology 2021-04-13 Bryce Morsky , Dervis Can Vural

For prebiotic chemistry to succeed in producing a starting metastable, autocatalytic and reproducing system subject to evolutionary selection it must satisfy at least two apparently contradictory requirements: Because such systems are rare,…

Populations and Evolution · Quantitative Biology 2021-01-04 Qianyi Sheng , Ben Intoy , J. W. Halley

Background: Literature shows that most of the information on the toxicity of gluten is generated from survey and observational studies, resulting in inconsistent outcomes and a decrease in the acceptability of gluten-rich foods. To…

Other Quantitative Biology · Quantitative Biology 2025-02-24 Tajudeen Yahaya , Esther Oladele , Ufuoma Shemishere , Daniel Anyebe , Haliru Abdullahi , Maryam Lawal , Rufai Ahmad

Background:Since the confinement of the lockdown, universities transferred their teaching and learning activities in online as an all-out intention to prevent the transmission of the infection. This study aimed to determine the significant…

Computers and Society · Computer Science 2024-07-31 Faysal Ahmed Imran , Mst Eshita Khatun

A fundamental goal of microbial ecology is to understand what determines the diversity, stability, and structure of microbial ecosystems. The microbial context poses special conceptual challenges because of the strong mutual influences…

Biological Physics · Physics 2019-03-06 Robert Marsland , Wenping Cui , Joshua Goldford , Alvaro Sanchez , Kirill Korolev , Pankaj Mehta

Antimicrobial protocols - using substances such as antibiotics or disinfectants - remain the preferred option for preventing the spread of pathogenic bacteria. However, bacteria can develop mechanisms to reduce their antimicrobial…

Populations and Evolution · Quantitative Biology 2026-02-17 Nerea Martínez-López , Niclas Nordholt , Frank Schreiber , Míriam R. García

{\it E. coli} bacteria swim in straight runs interrupted by sudden reorientation events called tumbles. The resulting random walks give rise to density fluctuations that can be derived analytically in the limit of non interacting particles…

Statistical Mechanics · Physics 2013-09-05 M. Paoluzzi , R. Di Leonardo , L. Angelani

We report bacterial growth under hypergravitational stress. Cultures of E. coli and B. subtilis were subjected to the gravitational stress (38g) and their growth curves were measured using UV-VIS spectrophotometer. Experiments were also…

Cell Behavior · Quantitative Biology 2014-07-22 Conrad Cabral , Chintamani Pai , Kashmira Prasade , Smruti Deoghare , Urooz Kazi , Sonalia Fernandes

Marine microorganisms often reach high swimming speeds, either to take advantage of evanescent nutrient patches or to beat Brownian forces. Since this implies that a sizable part of their energetic budget must be allocated to motion, it is…

Biological Physics · Physics 2015-06-16 Mario E. Di Salvo , C. A. Condat

Background: This study investigates glucose conditions preceding and following various hypoglycemia levels in individuals with type 1 diabetes using open-source automated insulin delivery (AID) systems. It also seeks to evaluate…

Quantitative Methods · Quantitative Biology 2024-05-16 Arsalan Shahid , Dana M. Lewis

Studying chemistry and chemical composition is fundamental to go back to formation history of planetary systems. We propose here to have another look at five targets to better determine their composition and the chemical mechanisms that…

Earth and Planetary Astrophysics · Physics 2023-10-25 Emilie Panek , Jean-Philippe Beaulieu , Pierre Drossart , Olivia Venot , Quentin Changeat , Ahmed Al-Refaie , Amélie Gressier

Bacteriophages are viruses infecting bacteria and archaea. Many phage species cause infections which lead to the certain death of the infected prokaryotic host cell and the release of a large batch of phage progeny, yet they have been able…

Populations and Evolution · Quantitative Biology 2019-12-24 Matthias M. Fischer

Microorganisms employ sophisticated mechanisms for intercellular communication and environmental sensing, with quorum sensing serving as a fundamental regulatory process. Dysregulation of quorum sensing has been implicated in various…

Emerging Technologies · Computer Science 2025-09-30 O. Tansel Baydas , Efe Yatgin , Ozgur B. Akan

We use a recently proposed staggered difference-in-differences approach to investigate effects of adoption of an online consultation system in English general practice on antibiotic prescribing patterns. The target estimand is the average…

Applications · Statistics 2023-06-02 Kate B. Ellis , Ruth H. Keogh , Geraldine M. Clarke , Stephen O'Neill

The state of chromatin in individual cells is directly related to the state of the whole organism and may be used for assessment of the state of the whole organism. Many hereditary diseases are connected with chromatin rearrangements.…

Cell Behavior · Quantitative Biology 2018-12-04 Yuriy Shckorbatov

Bacteria commonly live in structured communities that affect human health and influence ecological systems. Heterogeneous populations, such as motile and non-motile populations, often coexist in bacteria communities. Motile subpopulations…

Biological Physics · Physics 2019-06-19 Haoran Xu , Justas Dauparas , Debasish Das , Eric Lauga , Yilin Wu