English
Related papers

Related papers: The Moran forest

200 papers

This paper studies a Markov chain for phylogenetic reconstruction which uses a popular transition between tree topologies known as subtree pruning-and-regrafting (SPR). We analyze the Markov chain in the simpler setting that the generating…

Populations and Evolution · Quantitative Biology 2015-03-13 Daniel Stefankovic , Eric Vigoda

For any set $\Omega$ of non-negative integers such that $\{0,1\}\subseteq \Omega$ and $\{0,1\}\ne \Omega$, we consider a random $\Omega$-$k$-tree ${\sf G}_{n,k}$ that is uniformly selected from all connected $k$-trees of $(n+k)$ vertices…

Probability · Mathematics 2016-05-18 Michael Drmota , Emma Yu Jin , Benedikt Stufler

In this article, we study a simple random walk on a decorated Galton-Watson tree, obtained from a Galton-Watson tree by replacing each vertex of degree $n$ with an independent copy of a graph $G_n$ and gluing the inserted graphs along the…

Probability · Mathematics 2022-08-02 Eleanor Archer

One of the most influential recent results in network analysis is that many natural networks exhibit a power-law or log-normal degree distribution. This has inspired numerous generative models that match this property. However, more recent…

Data Structures and Algorithms · Computer Science 2011-09-01 Isabelle Stanton , Ali Pinar

Let $T$ be a random tree taken uniformly at random from the family of labelled trees on $n$ vertices. In this note, we provide bounds for $c(n)$, the number of sub-trees of $T$ that hold asymptotically almost surely. With computer support…

Combinatorics · Mathematics 2018-08-16 Bogumil Kaminski , Pawel Pralat

Given $t\geq 2$ and $0\leq k\leq t$, we prove that the number of labelled $k$-connected chordal graphs with $n$ vertices and tree-width at most $t$ is asymptotically $c n^{-5/2} \gamma^n n!$, as $n\to\infty$, for some constants $c,\gamma…

Combinatorics · Mathematics 2024-02-02 Jordi Castellví , Michael Drmota , Marc Noy , Clément Requilé

We provide asymptotics for the range R(n) of a random walk on the d-dimensional lattice indexed by a random tree with n vertices. Using Kingman's subadditive ergodic theorem, we prove under general assumptions that R(n)/n converges to a…

Probability · Mathematics 2013-07-22 Jean-François Le Gall , Shen Lin

Consider a random walk on a tree $G=(V,E)$. For $v,w \in V$, let the hitting time $H(v,w)$ denote the expected number of steps required for the random walk started at $v$ to reach $w$, and let $\pi_v = \mathrm{deg}(v)/2|E|$ denote the…

Combinatorics · Mathematics 2025-08-06 Andrew Beveridge , Ben Bridenbaugh , Ari Holcombe Pomerance

The global structure of the minimal spanning tree (MST) is expected to be universal for a large class of underlying random discrete structures. However, very little is known about the intrinsic geometry of MSTs of most standard models, and…

Probability · Mathematics 2021-06-01 Louigi Addario-Berry , Sanchayan Sen

The real trees form a class of metric spaces that extends the class of trees with edge lengths by allowing behavior such as infinite total edge length and vertices with infinite branching degree. Aldous's Brownian continuum random tree, the…

Probability · Mathematics 2007-05-23 Steven N. Evans , Jim Pitman , Anita Winter

Let $G$ be a connected graph with vertex set $V(G)$, and denote by $d_G(u,v)$ the distance from $u$ to $v$ in $G$, for any $u,v \in V(G)$. The average distance of an $n$-vertex connected graph $G$, denoted by $\mu(G)$, is defined to be the…

Combinatorics · Mathematics 2026-05-07 Zhibin Du , Xuli Qi

We prove almost sure convergence of the maximum degree in an evolving tree model combining local choice and preferential attachment. At each step in the growth of the graph, a new vertex is introduced. A fixed, finite number of possible…

Probability · Mathematics 2014-03-19 Yury Malyshkin , Elliot Paquette

We prove that every oriented tree on $n$ vertices with bounded maximum degree appears as a spanning subdigraph of every directed graph on $n$ vertices with minimum semidegree at least $n/2+o(n)$. This can be seen as a directed graph…

Combinatorics · Mathematics 2026-05-20 Richard Mycroft , Tássio Naia

In this paper we show how to find nearly optimal embeddings of large trees in several natural classes of graphs. The size of the tree T can be as large as a constant fraction of the size of the graph G, and the maximum degree of T can be…

Combinatorics · Mathematics 2007-07-17 Benny Sudakov , Jan Vondrak

Alavi, Malde, Schwenk and Erd\H{o}s asked whether the independent set sequence of every tree is unimodal. Here we make some observations about this question. We show that for the uniformly random (labelled) tree, asymptotically almost…

Combinatorics · Mathematics 2021-07-06 Abdul Basit , David Galvin

We investigate the degree-degree correlations in the Erdos-Renyi networks, the growing exponential networks and the scale-free networks. We demonstrate that these correlations are the largest for the exponential networks. We calculate also…

Disordered Systems and Neural Networks · Physics 2009-08-24 Anna Manka-Krason , Krzysztof Kulakowski

We introduce block Markov chains (BMCs) indexed by an infinite rooted tree. It turns out that BMCs define a new class of tree-indexed Markovian processes. We clarify the structure of BMCs in connection with Markov chains (MCs) and Markov…

Probability · Mathematics 2020-08-25 Abdessatar Souissi

We consider the ensemble of N-dimensional random symmetric matrices A that have, in average, p non-zero elements per row. We study the asymptotic behavior of the norm of A in the limit of infinitely increasing N and p. We prove that the…

Probability · Mathematics 2014-11-18 A. Khorunzhy

We consider invasion percolation on the randomly-weighted complete graph $K_n$, started from some number $k(n)$ of distinct source vertices. The outcome of the process is a forest consisting of $k(n)$ trees, each containing exactly one…

Probability · Mathematics 2022-08-16 Louigi Addario-Berry , Jordan Barrett

In this paper, we set forth a new algorithm for generating approximately uniformly random spanning trees in undirected graphs. We show how to sample from a distribution that is within a multiplicative $(1+\delta)$ of uniform in expected…

Data Structures and Algorithms · Computer Science 2009-08-12 Jonathan A. Kelner , Aleksander Madry