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Confidentiality of patient information is an essential part of Electronic Health Record System. Patient information, if exposed, can cause a serious damage to the privacy of individuals receiving healthcare. Hence it is important to remove…

Machine Learning · Computer Science 2018-08-06 Abhai Kollara Dilip , Kamal Raj K , Malaikannan Sankarasubbu

In the era of big data, there is an increasing need for healthcare providers, communities, and researchers to share data and collaborate to improve health outcomes, generate valuable insights, and advance research. The Health Insurance…

Cryptography and Security · Computer Science 2023-05-23 Kai Zhang , Xiaoqian Jiang

Despite recent advances in natural language processing, many statistical models for processing text perform extremely poorly under domain shift. Processing biomedical and clinical text is a critically important application area of natural…

Computation and Language · Computer Science 2021-03-24 Mark Neumann , Daniel King , Iz Beltagy , Waleed Ammar

De-identification is the task of detecting protected health information (PHI) in medical text. It is a critical step in sanitizing electronic health records (EHRs) to be shared for research. Automatic de-identification classifierscan…

Computation and Language · Computer Science 2019-06-13 Max Friedrich , Arne Köhn , Gregor Wiedemann , Chris Biemann

In the field of machine learning, domain-specific annotated data is an invaluable resource for training effective models. However, in the medical domain, this data often includes Personal Health Information (PHI), raising significant…

Computation and Language · Computer Science 2024-09-13 Tal Baumel , Andre Manoel , Daniel Jones , Shize Su , Huseyin Inan , Aaron , Bornstein , Robert Sim

Leveraging medical record information in the era of big data and machine learning comes with the caveat that data must be cleaned and de-identified. Facilitating data sharing and harmonization for multi-center collaborations are…

Image and Video Processing · Electrical Eng. & Systems 2023-05-11 Adrienne Kline , Vinesh Appadurai , Yuan Luo , Sanjiv Shah

Medical data employed in research frequently comprises sensitive patient health information (PHI), which is subject to rigorous legal frameworks such as the General Data Protection Regulation (GDPR) or the Health Insurance Portability and…

Image and Video Processing · Electrical Eng. & Systems 2024-10-17 Moritz Rempe , Lukas Heine , Constantin Seibold , Fabian Hörst , Jens Kleesiek

Objective: To enhance automated de-identification of radiology reports by scaling transformer-based models through extensive training datasets and benchmarking performance against commercial cloud vendor systems for protected health…

Computation and Language · Computer Science 2025-11-24 Eva Prakash , Maayane Attias , Pierre Chambon , Justin Xu , Steven Truong , Jean-Benoit Delbrouck , Tessa Cook , Curtis Langlotz

Removing patient-specific information from medical images is crucial to enable sharing and open science without compromising patient identities. However, many methods currently used for deidentification have negative effects on downstream…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Adrienne Kline , Abhijit Gaonkar , Daniel Pittman , Chris Kuehn , Nils Forkert

De-identification is the process of removing 18 protected health information (PHI) from clinical notes in order for the text to be considered not individually identifiable. Recent advances in natural language processing (NLP) has allowed…

Computation and Language · Computer Science 2018-10-04 Kaung Khin , Philipp Burckhardt , Rema Padman

Medical health records and clinical summaries contain a vast amount of important information in textual form that can help advancing research on treatments, drugs and public health. However, the majority of these information is not shared…

Computation and Language · Computer Science 2020-10-13 Nikola Milosevic , Gangamma Kalappa , Hesam Dadafarin , Mahmoud Azimaee , Goran Nenadic

Accurately labeling biomedical data presents a challenge. Traditional semi-supervised learning methods often under-utilize available unlabeled data. To address this, we propose a novel reliability-based training data cleaning method…

Machine Learning · Computer Science 2023-09-15 Xianghao Zhan , Qinmei Xu , Yuanning Zheng , Guangming Lu , Olivier Gevaert

The advent of cost effective cloud computing over the past decade and ever-growing accumulation of high-fidelity clinical data in a modern hospital setting is leading to new opportunities for translational medicine. Machine learning is…

Databases · Computer Science 2021-06-09 Sanjay Malunjkar , Susan Weber , Somalee Datta

Hyperspectral imaging (HSI) is an advanced medical imaging modality that captures optical data across a broad spectral range, providing novel insights into the biochemical composition of tissues. HSI may enable precise differentiation…

Image and Video Processing · Electrical Eng. & Systems 2024-08-07 Zhonghao Wang , Junwen Wang , Charlie Budd , Oscar MacCormac , Jonathan Shapey , Tom Vercauteren

Brain Computer Interface (BCI) technologies have the potential to improve the lives of millions of people around the world, whether through assistive technologies or clinical diagnostic tools. Despite advancements in the field, however, at…

Machine Learning · Computer Science 2023-01-31 Chad Mello , Troy Weingart , Ethan M. Rudd

Diagnostic data such as logs and memory dumps from production systems are often shared with development teams to do root cause analysis of system crashes. Invariably such diagnostic data contains sensitive information and sharing it can…

Cryptography and Security · Computer Science 2021-09-09 Akshar Kaul , Manish Kesarwani , Hong Min , Qi Zhang

Curating, processing, and combining large-scale medical imaging datasets from national studies is a non-trivial task due to the intense computation and data throughput required, variability of acquired data, and associated financial…

Data sharing is crucial for open science and reproducible research, but the legal sharing of clinical data requires the removal of protected health information from electronic health records. This process, known as de-identification, is…

Machine Learning · Computer Science 2024-01-04 Yuxin Xiao , Shulammite Lim , Tom Joseph Pollard , Marzyeh Ghassemi

Deep learning has driven significant advances in medical image analysis, yet its adoption in clinical practice remains constrained by the large size and lack of transparency in modern models. Advances in interpretability techniques such as…

Computer Vision and Pattern Recognition · Computer Science 2025-09-23 Nikita Malik , Pratinav Seth , Neeraj Kumar Singh , Chintan Chitroda , Vinay Kumar Sankarapu

Objective: Patient notes in electronic health records (EHRs) may contain critical information for medical investigations. However, the vast majority of medical investigators can only access de-identified notes, in order to protect the…

Computation and Language · Computer Science 2016-06-14 Franck Dernoncourt , Ji Young Lee , Ozlem Uzuner , Peter Szolovits
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