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The behaviour and functioning of a variety of complex physical and biological systems depend on the spatial organisation of their constituent units, and on the presence and formation of clusters of functionally similar or related…

Physics and Society · Physics 2023-08-16 Silvia Rognone , Vincenzo Nicosia

Feature generation is an open topic of investigation in graph machine learning. In this paper, we study the use of graph homomorphism density features as a scalable alternative to homomorphism numbers which retain similar theoretical…

Machine Learning · Computer Science 2021-04-12 Paul Beaujean , Florian Sikora , Florian Yger

Graph clustering is the process of grouping vertices into densely connected sets called clusters. We tailor two mathematical programming formulations from the literature, to this problem. In doing so, we obtain a heuristic approximation to…

Machine Learning · Computer Science 2023-10-31 Pierre Miasnikof , Mohammad Bagherbeik , Ali Sheikholeslami

Identifying clusters of vertices in graphs continues to be an important problem, and modularity continues to be used as a tool for solving the problem. Modularity, which measures the quality of a division of the vertices into clusters,…

Social and Information Networks · Computer Science 2021-09-13 Larry Wilson

Even though clustering trajectory data attracted considerable attention in the last few years, most of prior work assumed that moving objects can move freely in an euclidean space and did not consider the eventual presence of an underlying…

Machine Learning · Computer Science 2012-10-04 Mohamed Khalil El Mahrsi , Fabrice Rossi

Introduced the quantitative measure of the structural complexity of the graph (complex network, etc.) based on a procedure similar to the renormalization process, considering the difference between actual and averaged graph structures on…

Physics and Society · Physics 2024-06-05 A. A. Snarskii

Network-valued data are encountered in a wide range of applications and pose challenges in learning due to their complex structure and absence of vertex correspondence. Typical examples of such problems include classification or grouping of…

Machine Learning · Computer Science 2021-11-09 Mahalakshmi Sabanayagam , Leena Chennuru Vankadara , Debarghya Ghoshdastidar

Many clustering algorithms when the data are curves or functions have been recently proposed. However, the presence of contamination in the sample of curves can influence the performance of most of them. In this work we propose a robust,…

The clustering coefficient quantifies how well connected are the neighbors of a vertex in a graph. In real networks it decreases with the vertex degree, which has been taken as a signature of the network hierarchical structure. Here we show…

Statistical Mechanics · Physics 2007-05-23 Sara Nadiv Soffer , Alexei Vazquez

This paper proposes an organized generalization of Newman and Girvan's modularity measure for graph clustering. Optimized via a deterministic annealing scheme, this measure produces topologically ordered graph clusterings that lead to…

Machine Learning · Statistics 2010-09-08 Fabrice Rossi , Nathalie Villa-Vialaneix

Graph classification benchmarks, vital for assessing and developing graph neural networks (GNNs), have recently been scrutinized, as simple methods like MLPs have demonstrated comparable performance. This leads to an important question: Do…

Machine Learning · Computer Science 2024-08-14 Zhengdao Li , Yong Cao , Kefan Shuai , Yiming Miao , Kai Hwang

Numerous papers ask how difficult it is to cluster data. We suggest that the more relevant and interesting question is how difficult it is to cluster data sets {\em that can be clustered well}. More generally, despite the ubiquity and the…

Machine Learning · Computer Science 2012-05-23 Amit Daniely , Nati Linial , Michael Saks

Selecting the number of communities is a fundamental challenge in network clustering. The silhouette score offers an intuitive, model-free criterion that balances within-cluster cohesion and between-cluster separation. Albeit its widespread…

Social and Information Networks · Computer Science 2026-01-01 Zongyue Teng , Jun Yan , Dandan Liu , Panpan Zhang

Cluster analysis is an unsupervised learning strategy that can be employed to identify subgroups of observations in data sets of unknown structure. This strategy is particularly useful for analyzing high-dimensional data such as microarray…

Methodology · Statistics 2016-10-07 Erika S. Helgeson , Eric Bair

This research introduces a new strategy in cluster ensemble selection by using Independency and Diversity metrics. In recent years, Diversity and Quality, which are two metrics in evaluation procedure, have been used for selecting basic…

Machine Learning · Statistics 2016-10-11 Muhammad Yousefnezhad , Ali Reihanian , Daoqiang Zhang , Behrouz Minaei-Bidgoli

Accurate pipe roughness estimation in large-scale water distribution networks is often hindered by the high cost of traditional field methods. This study investigates whether network partitioning, by utilizing hydraulic and graph-derived…

Computational Engineering, Finance, and Science · Computer Science 2026-04-28 Karol Dykiert , Mateusz Stolarski , Michał Czuba , Wojciech Cieżak , Piotr Bródka

We show that modularity, a quantity introduced in the study of networked systems, can be generalized and used in the clustering problem as an indicator for the quality of the solution. The introduction of this measure arises very naturally…

Statistical Mechanics · Physics 2009-11-11 L. Angelini , D. Marinazzo , M. Pellicoro , S. Stramaglia

Graph neural networks (GNNs) based methods have achieved impressive performance on node clustering task. However, they are designed on the homophilic assumption of graph and clustering on heterophilic graph is overlooked. Due to the lack of…

Social and Information Networks · Computer Science 2023-05-09 Erlin Pan , Zhao Kang

In this paper, we present a novel way to summarize the structure of large graphs, based on non-parametric estimation of edge density in directed multigraphs. Following coclustering approach, we use a clustering of the vertices, with a…

Social and Information Networks · Computer Science 2015-08-07 Marc Boullé

There are various cluster validity indices used for evaluating clustering results. One of the main objectives of using these indices is to seek the optimal unknown number of clusters. Some indices work well for clusters with different…

Machine Learning · Statistics 2024-01-09 Nathakhun Wiroonsri