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Are biological networks different from other large complex networks? Both large biological and non-biological networks exhibit power-law graphs (number of nodes with degree k, N(k) ~ k-b) yet the exponents, b, fall into different ranges.…

Condensed Matter · Physics 2007-05-23 Fan Chung , Linyuan Lu , T. Gregory Dewey , David J. Galas

Recently, we introduced a quantity, "node weight", to describe the collaboration sharing or competition gain of the elements in the collaboration-competition networks, which can be well described by bipartite graphs. We find that the node…

Physics and Society · Physics 2009-11-27 Xiu-Lian Xu , Chun-Hua Fu , Dan Shen , Ai-Fen Liu , Da-Ren He

We highlight intriguing features of complex networks that are grown by \emph{redirection}. In this mechanism, a target node is chosen uniformly at random from the pre-existing network nodes and the new node attaches either to this initial…

Physics and Society · Physics 2025-01-14 P. L. Krapivsky , S. Redner

Many real-world complex networks arise as a result of a competition between growth and rewiring processes. Usually the initial part of the evolution is dominated by growth while the later one rather by rewiring. The initial growth allows…

Statistical Mechanics · Physics 2020-10-07 Zdzislaw Burda , Michalina Kotwica , Krzysztof Malarz

A novel Markovian network evolution model is introduced and analysed by means of information theory. It will be proved that the model, called Network Evolution Chain, is a stationary and ergodic stochastic process. Therefore, the Asymptotic…

Information Theory · Computer Science 2022-01-21 Amirmohammad Farzaneh , Justin P. Coon

Preferential attachment --- by which new nodes attach to existing nodes with probability proportional to the existing nodes' degree --- has become the standard growth model for scale-free networks, where the asymptotic probability of a node…

Adaptation and Self-Organizing Systems · Physics 2014-11-12 Michael Small , Yingying Li , Thomas Stemler , Kevin Judd

Genomic duplication-divergence events, which are the primary source of new protein functions, occur stochastically at a wide range of genomic scales, from single gene to whole genome duplications. Clearly, this fundamental evolutionary…

Molecular Networks · Quantitative Biology 2007-05-23 Kirill Evlampiev , Herve Isambert

In many real world networks, the number of links increases nonlinearly with the number of nodes. Models of such accelerated growth have been considered earlier with deterministic and stochastic number of links. Here we consider stochastic…

Statistical Mechanics · Physics 2009-11-10 Parongama Sen

Adaptive networks are a novel class of dynamical networks whose topologies and states coevolve. Many real-world complex systems can be modeled as adaptive networks, including social networks, transportation networks, neural networks and…

Social and Information Networks · Computer Science 2017-05-29 Hiroki Sayama , Irene Pestov , Jeffrey Schmidt , Benjamin James Bush , Chun Wong , Junichi Yamanoi , Thilo Gross

Systems of dynamical interactions between competing species can be used to model many complex systems, and can be mathematically described by {\em random} networks. Understanding how patterns of activity arise in such systems is important…

Adaptation and Self-Organizing Systems · Physics 2016-01-21 Nick McCullen , Thomas Wagenknecht

Cellular functions are based on the complex interplay of proteins, therefore the structure and dynamics of these protein-protein interaction (PPI) networks are the key to the functional understanding of cells. In the last years, large-scale…

Molecular Networks · Quantitative Biology 2013-03-27 Yuliang Jin , Dmitrij Turaev , Thomas Weinmaier , Thomas Rattei , Hernan A. Makse

Individual nodes in evolving real-world networks typically experience growth and decay --- that is, the popularity and influence of individuals peaks and then fades. In this paper, we study this phenomenon via an intrinsic nodal fitness…

Physics and Society · Physics 2015-05-20 Xin-Jian Xu , Xiao-Long Peng , Michael Small , Xin-Chu Fu

We investigate various aspects of the statistics of leaders in growing network models defined by stochastic attachment rules. The leader is the node with highest degree at a given time (or the node which reached that degree first if there…

Physics and Society · Physics 2010-02-05 C. Godreche , H. Grandclaude , J. M. Luck

Nowadays there is a multitude of measures designed to capture different aspects of network structure. To be able to say if the structure of certain network is expected or not, one needs a reference model (null model). One frequently used…

Other Quantitative Biology · Quantitative Biology 2007-05-23 Petter Holme , Jing Zhao

We study directed random graphs (random graphs whose edges are directed) as they evolve in discrete time by the addition of nodes and edges. For two distinct evolution strategies, one that forces the graph to a condition of near acyclicity…

Statistical Mechanics · Physics 2007-05-23 Valmir C. Barbosa , Raul Donangelo , Sergio R. Souza

The distribution of distances in the star graph $ST_n$, ($1<n\in\Z$), is established, and subsequently a threaded binary tree is obtained that realizes an orientation of $ST_n$ whose levels are given by the distances to the identity…

Combinatorics · Mathematics 2010-11-16 Italo J. Dejter

We study the interplay between evolutionary game and network structure and show how the dynamics of the game affect the growth pattern of the network and how the evolution of the network influence the cooperative behavior in the game.…

Physics and Society · Physics 2007-05-23 Jie Ren , Xiang Wu , Wen-Xu Wang , Guanrong Chen , Bing-Hong Wang

Information diffusion in online social networks is affected by the underlying network topology, but it also has the power to change it. Online users are constantly creating new links when exposed to new information sources, and in turn…

Social and Information Networks · Computer Science 2016-04-04 Mehrdad Farajtabar , Yichen Wang , Manuel Gomez Rodriguez , Shuang Li , Hongyuan Zha , Le Song

We study a supremacy distribution in evolving Barabasi-Albert networks. The supremacy $s_i$ of a node $i$ is defined as a total number of all nodes that are younger than $i$ and can be connected to it by a directed path. For a network with…

Statistical Mechanics · Physics 2009-11-10 Janusz A. Holyst , Agata Fronczak , Piotr Fronczak

This study examines long-term trends and shifting behavior in the collaboration network of mathematics literature, using a subset of data from Mathematical Reviews spanning 1985-2009. Rather than modeling the network cumulatively, this…