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Almost all real-world networks are subject to constant evolution, and plenty of evolving networks have been investigated to uncover the underlying mechanisms for a deeper understanding of the organization and development of them. Compared…

Social and Information Networks · Computer Science 2016-10-12 Tao Wu , Leiting Chen

This paper presents an evolution model of weighted networks in which the structural growth and weight dynamics are driven by human behavior, i.e. passenger route choice behavior. Transportation networks grow due to people's increasing…

Physics and Society · Physics 2007-09-27 Yihong Hu , Daoli Zhu , Nianqu Zhu

We propose a model for the growth of weighted networks that couples the establishment of new edges and vertices and the weights' dynamical evolution. The model is based on a simple weight-driven dynamics and generates networks exhibiting…

Disordered Systems and Neural Networks · Physics 2009-11-10 Alain Barrat , Marc Barthelemy , Alessandro Vespignani

Collaboration networks are studied as an example of growing bipartite networks. These have been previously observed to have structure such as positive correlations between nearest-neighbour degrees. However, a detailed understanding of the…

Physics and Society · Physics 2009-11-11 Matti Peltomaki , Mikko Alava

In this work we study a simple evolutionary model of bipartite networks which its evolution is based on the duplication of nodes. Using analytical results along with numerical simulation of the model, we show that the above evolutionary…

Disordered Systems and Neural Networks · Physics 2009-11-10 A. Ramezanpour

We propose a model of network growth in which the network is co-evolving together with the dynamics of a quantum mechanical system, namely a quantum walk taking place over the network. The model naturally generalizes the Barab\'{a}si-Albert…

We model the evolution of eukaryotic protein-protein interaction (PPI) networks. In our model, PPI networks evolve by two known biological mechanisms: (1) Gene duplication, which is followed by rapid diversification of duplicate…

Molecular Networks · Quantitative Biology 2015-01-07 Jack Peterson , Steve Presse , Kristin S. Peterson , Ken A. Dill

We study the evolution of a random weighted network with complex nonlinear dynamics at each node, whose activity may cease as a result of interactions with other nodes. Starting from a knowledge of the micro-level behaviour at each node, we…

Statistical Mechanics · Physics 2007-05-23 Sitabhra Sinha , Sudeshna Sinha

The concept of node walk in graphs and complex networks has been addressed, consisting of one or more nodes that move into adjacent nodes, henceforth incorporating the respective connections. This type of dynamics is then applied to subsume…

Physics and Society · Physics 2024-06-07 Alexandre Benatti , Luciano da F. Costa

Growing synthetic networks that follow power law distributions of a node's degree often involves adding one node at a time. Each node is added to the network with a fixed amount of edges and those edges are frozen for all future time steps.…

Physics and Society · Physics 2026-01-27 Justin Downes

We investigate an extremal dynamics model of evolution with a variable number of units. Due to addition and removal of the units, the topology of the network evolves and the network splits into several clusters. The activity is mostly…

Statistical Mechanics · Physics 2009-10-31 Frantisek Slanina , Miroslav Kotrla

Nested structure, which is non-random, controls cooperation dynamics and biodiversity in plant-animal mutualistic networks. This structural pattern has been explained in a static (non-growth) network models. However, evolutionary processes…

Populations and Evolution · Quantitative Biology 2015-03-19 Kazuhiro Takemoto , Masanori Arita

The analysis in this paper helps to explain the formation of growing networks with degree distributions that follow extended exponential or power-law tails. We present a generic model in which edge dynamics are driven by a continuous…

Physics and Society · Physics 2020-11-12 Jan Medina-López , Jorge Finke

Imitation is a basic updating mechanism for strategy evolution in structured populations, determining how individuals sample social information and translate it into behavioral changes. Higher-order networks, such as hypergraphs, generalize…

Physics and Society · Physics 2026-02-11 Bingxin Lin , Lei Zhou , Hao Fang

Adaptive networks have been recently introduced in the context of disease propagation on complex networks. They account for the mutual interaction between the network topology and the states of the nodes. Until now, existing models have…

Statistical Mechanics · Physics 2010-09-28 Vincent Marceau , Pierre-André Noël , Laurent Hébert-Dufresne , Antoine Allard , Louis J. Dubé

Complex dynamical systems are often modeled as networks, with nodes representing dynamical units which interact through the network's links. Gene regulatory networks, responsible for the production of proteins inside a cell, are an example…

Statistical Mechanics · Physics 2009-09-30 Zoran Levnajić

Large complex networks are often organized into groups or communities. In this paper, we introduce and investigate a generative model of network evolution that reproduces all four pairwise community types that exist in directed networks:…

Social and Information Networks · Computer Science 2025-02-14 Cathy Xuanchi Liu , Tristram J. Alexander , Eduardo G. Altmann

In this work we study the behavior of classical two-person, two-strategies evolutionary games on a class of weighted networks derived from Barab\'asi-Albert and random scale-free unweighted graphs. Using customary imitative dynamics, our…

Physics and Society · Physics 2012-01-31 Pierre Buesser , Marco Tomassini

Biomolecular networks have already found great utility in characterizing complex biological systems arising from pair-wise interactions amongst biomolecules. Here, we review how graph theoretical approaches can be applied not only for a…

Molecular Networks · Quantitative Biology 2018-12-03 Heeralal Janwa , Steven E. Massey , Julian Velev , Bud Mishra

How cooperation emerges in human societies is both an evolutionary enigma, and a practical problem with tangible implications for societal health. Population structure has long been recognized as a catalyst for cooperation because local…

Populations and Evolution · Quantitative Biology 2022-01-06 Qi Su , Joshua. B Plotkin