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The multiplication of a matrix by its transpose, $A^T A$, appears as an intermediate operation in the solution of a wide set of problems. In this paper, we propose a new cache-oblivious algorithm (ATA) for computing this product, based upon…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-08 Viviana Arrigoni , Filippo Maggioli , Annalisa Massini , Emanuele Rodolà

A novel parallel algorithm for matrix multiplication is presented. The hyper-systolic algorithm makes use of a one-dimensional processor abstraction. The procedure can be implemented on all types of parallel systems. It can handle…

Mathematical Software · Computer Science 2007-05-23 Thomas Lippert , Nikolay Petkov , Paolo Palazzari , Klaus Schilling

We present a novel characterization of the mapping of multiple parallelism forms (e.g. data and model parallelism) onto hierarchical accelerator systems that is hierarchy-aware and greatly reduces the space of software-to-hardware mapping.…

Programming Languages · Computer Science 2021-11-17 Ningning Xie , Tamara Norman , Dominik Grewe , Dimitrios Vytiniotis

The trend towards highly parallel multi-processing is ubiquitous in all modern computer architectures, ranging from handheld devices to large-scale HPC systems; yet many applications are struggling to fully utilise the multiple levels of…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-07-19 Michael Lange , Gerard Gorman , Michele Weiland , Lawrence Mitchell , Xiaohu Guo , James Southern

Multigrid methods have proven to be an invaluable tool to efficiently solve large sparse linear systems arising in the discretization of partial differential equations (PDEs). Algebraic multigrid methods and in particular adaptive algebraic…

Numerical Analysis · Mathematics 2020-04-27 Hanno Gottschalk , Karsten Kahl

We study the problem of multiplying two bit matrices with entries either over the Boolean algebra $(0,1,\vee,\wedge)$ or over the binary field $(0,1,+,\cdot)$. We engineer high-performance open-source algorithm implementations for…

Data Structures and Algorithms · Computer Science 2019-09-05 Matti Karppa , Petteri Kaski

Reducing the memory footprint of neural networks is a crucial prerequisite for deploying them in small and low-cost embedded devices. Network parameters can often be reduced significantly through pruning. We discuss how to best represent…

Data Structures and Algorithms · Computer Science 2021-11-25 Elias Trommer , Bernd Waschneck , Akash Kumar

We implement two novel algorithms for sparse-matrix dense-matrix multiplication (SpMM) on the GPU. Our algorithms expect the sparse input in the popular compressed-sparse-row (CSR) format and thus do not require expensive format conversion.…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-06-13 Carl Yang , Aydin Buluc , John D. Owens

Counting the number of perfect matchings in bipartite graphs, or equivalently computing the permanent of 0-1 matrices, is an important combinatorial problem that has been extensively studied by theoreticians and practitioners alike. The…

Data Structures and Algorithms · Computer Science 2019-08-12 Supratik Chakraborty , Aditya A. Shrotri , Moshe Y. Vardi

Current Adaptive Mesh Refinement (AMR) simulations require algorithms that are highly parallelized and manage memory efficiently. As compute engines grow larger, AMR simulations will require algorithms that achieve new levels of efficient…

Solar and Stellar Astrophysics · Physics 2015-03-19 Jonathan J. Carroll-Nellenback , Brandon Shroyer , Adam Frank , Chen Ding

In prior work, Gupta et al. (SPAA 2022) presented a distributed algorithm for multiplying sparse $n \times n$ matrices, using $n$ computers. They assumed that the input matrices are uniformly sparse--there are at most $d$ non-zeros in each…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-24 Chetan Gupta , Janne H. Korhonen , Jan Studený , Jukka Suomela , Hossein Vahidi

The efficient solution of large-scale multiterm linear matrix equations is a challenging task in numerical linear algebra, and it is a largely open problem. We propose a new iterative scheme for symmetric and positive definite operators,…

Numerical Analysis · Mathematics 2025-05-27 Davide Palitta , Martina Iannacito , Valeria Simoncini

Matrix Factorization (MF) has been widely applied in machine learning and data mining. A large number of algorithms have been studied to factorize matrices. Among them, stochastic gradient descent (SGD) is a commonly used method.…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-30 Yuanhang Yu , Dong Wen , Ying Zhang , Xiaoyang Wang , Wenjie Zhang , Xuemin Lin

Recent hardware acceleration advances have enabled powerful specialized accelerators for finite element computations, spiking neural network inference, and sparse tensor operations. However, existing approaches face fundamental limitations:…

Hardware Architecture · Computer Science 2026-01-09 Chuanzhen Wang , Leo Zhang , Eric Liu

Iterative methods for solving large sparse systems of linear equations are widely used in many HPC applications. Extreme scaling of these methods can be difficult, however, since global communication to form dot products is typically…

Mathematical Software · Computer Science 2020-09-29 Nick Brown , J. Mark Bull , Iain Bethune

The research in parallel machine scheduling in combinatorial optimization suggests that the desirable parallel efficiency could be achieved when the jobs are sorted in the non-increasing order of processing times. In this paper, we find…

Numerical Analysis · Mathematics 2012-02-15 Lei Wang , Heng Liang , Fengshan Bai , Yan Huo

The accurate assembly of the system matrix is an important step in any code that solves partial differential equations on a mesh. We either explicitly set up a matrix, or we work in a matrix-free environment where we have to be able to…

Mathematical Software · Computer Science 2020-06-19 Charles D. Murray , Tobias Weinzierl

Sparse linear algebra kernels play a critical role in numerous applications, covering from exascale scientific simulation to large-scale data analytics. Offloading linear algebra kernels on one GPU will no longer be viable in these…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-19 Jieyang Chen , Chenhao Xie , Jesun S Firoz , Jiajia Li , Shuaiwen Leon Song , Kevin Barker , Mark Raugas , Ang Li

General sparse matrix-matrix multiplication (SpGEMM) is a fundamental building block for numerous applications such as algebraic multigrid method (AMG), breadth first search and shortest path problem. Compared to other sparse BLAS routines,…

Mathematical Software · Computer Science 2015-09-15 Weifeng Liu , Brian Vinter

Sparse tensor computing is a core computational part of numerous applications in areas such as data science, graph processing, and scientific computing. Sparse tensors offer the potential of skipping unnecessary computations caused by zero…

Hardware Architecture · Computer Science 2023-03-28 Midia Reshadi , David Gregg