Related papers: An invertible transform for efficient string match…

Let $G$ be a graph and $A$ be its adjacency matrix. A graph $G$ is invertible if its adjacency matrix $A$ is invertible and the inverse of $G$ is a weighted graph with adjacency matrix $A^{-1}$. A signed graph $(G,\sigma)$ is a weighted…

Let $X=(V\!X,E\!X)$ be an infinite, locally finite, connected graph without loops or multiple edges. We consider the edges to be oriented, and $E\!X$ is equipped with an involution which inverts the orientation. Each oriented edge is…

In this paper, we analyze the dynamics of quantum walks on a graph structure resulting from the integration of a main connected graph $G$ and a secondary connected graph $G'$. This composite graph is formed by a disjoint union of $G$ and…

We say that a vertex $v$ in a connected graph $G$ is decisive if the numbers of walks from $v$ of each length determine the graph $G$ rooted at $v$ up to isomorphism among all connected rooted graphs with the same number of vertices. On the…

Let $G$ be a graph and let $f$ be a positive integer-valued function on $V(G)$. In this paper, we show that if for all $S\subseteq V(G)$, $\omega(G\setminus S)<\sum_{v\in S}(f(v)-2)+2+\omega(G[S])$, then $G$ has a spanning tree $T$…

Given a string of characters, the Burrows-Wheeler Transform rearranges the characters in it so as to produce another string of the same length which is more amenable to compression techniques such as move to front, run-length encoding, and…

Simultaneous Geometric Embedding (SGE) asks whether, for a given collection of graphs on the same vertex set V, there is an embedding of V in the plane that admits a crossing-free drawing with straightline edges for each of the given…

A degenerate or indeterminate string on an alphabet $\Sigma$ is a sequence of non-empty subsets of $\Sigma$. Given a degenerate string $t$ of length $n$, we present a new method based on the Burrows--Wheeler transform for searching for a…

The Burrows-Wheeler Transform is a string transformation that plays a fundamental role for the design of self-indexing compressed data structures. Over the years, researchers have successfully extended this transformation outside the…

For an arbitrary word $w$ on an alphabet, we can define the alternating symbol graph, $G(w)$, as the graph in which the edge $(a, b)$ is in $E$ iff the letters $a$ and $b$ alternate in the word $w$. A graph $G = (V, E)$ is said to be…

The distinguishing number (index) $D(G)$ ($D'(G)$) of a graph $G$ is the least integer $d$ such that $G$ has an vertex (edge) labeling with $d$ labels that is preserved only by the trivial automorphism. It is known that for every graph $G$…

The distinguishing number (index) $D(G)$ ($D'(G)$) of a graph $G$ is the least integer $d$ such that $G$ has an vertex (edge) labeling with $d$ labels that is preserved only by the trivial automorphism. It is known that for every graph $G$…

Consider the following computational problem: given a regular digraph $G=(V,E)$, two vertices $u,v \in V$, and a walk length $t\in \mathbb{N}$, estimate the probability that a random walk of length $t$ from $u$ ends at $v$ to within $\pm…

A temporal digraph ${\cal G}$ is a triple $(G, \gamma, \lambda)$ where $G$ is a digraph, $\gamma$ is a function on $V(G)$ that tells us the timestamps when a vertex is active, and $\lambda$ is a function on $E(G)$ that tells for each $uv…

Given a graph $G=(V,E)$ and a set of terminal vertices $T$ we say that a superset $S$ of $T$ is $T$-connecting if $S$ induces a connected graph, and $S$ is minimal if no strict subset of $S$ is $T$-connecting. In this paper we prove that…

The simplest way to make a dynamical system out of a finite connected graph $G$ is to give it a polarization, that is to say a cyclic ordering of the edges incident to a vertex, for each vertex. The phase space $\mathcal{P}(G)$ then…

Exact pattern matching in labeled graphs is the problem of searching paths of a graph $G=(V,E)$ that spell the same string as the given pattern $P[1..m]$. This basic problem can be found at the heart of more complex operations on variation…

For a graph $G$, two dominating sets $D$ and $D'$ in $G$, and a non-negative integer $k$, the set $D$ is said to $k$-transform to $D'$ if there is a sequence $D_0,\ldots,D_\ell$ of dominating sets in $G$ such that $D=D_0$, $D'=D_\ell$,…

Let $G$ be a Wheeler graph and $r$ be the number of runs in a Burrows-Wheeler Transform of $G$, and suppose $G$ can be decomposed into $\upsilon$ edge-disjoint directed paths whose internal vertices each have in- and out-degree exactly 1.…

Let $G$ be a finite simple graph with oriented incidence matrix $D$. The signed graph on edge set $E(G)$ with adjacency matrix \[ A_{\mathcal A(G)}=D^{\mathsf T}D-2I \] is classical in the signed-line-graph literature. In this paper we…