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The R package innsight offers a general toolbox for revealing variable-wise interpretations of deep neural networks' predictions with so-called feature attribution methods. Aside from the unified and user-friendly framework, the package…

Machine Learning · Statistics 2025-01-22 Niklas Koenen , Marvin N. Wright

Network representations have been effectively employed to analyze complex systems across various areas and applications, leading to the development of network science as a core tool to study systems with multiple components and complex…

Neurons and Cognition · Quantitative Biology 2023-07-25 ItaloIvo Lima Dias Pinto , Javier Omar Garcia , Kanika Bansal

One of the contemporary challenges in anomaly detection is the ability to detect, and differentiate between, both point and collective anomalies within a data sequence or time series. The anomaly package has been developed to provide users…

Applications · Statistics 2024-01-30 Alex Fisch , Daniel Grose , Idris A. Eckley , Paul Fearnhead , Lawrence Bardwell

In the past decade, cities have experienced rapid growth, expansion, and changes in their community structure. Many aspects of critical urban infrastructure are closely coupled with the human communities that they serve. Urban communities…

Social and Information Networks · Computer Science 2018-12-12 Weisi Guo , Guillem Mosquera Donate , Stephen Law , Samuel Johnson , Maria Liakata , Alan Wilson

Community structure detection in complex networks is important since it can help better understand the network topology and how the network works. However, there is still not a clear and widely-accepted definition of community structure,…

Social and Information Networks · Computer Science 2013-05-14 Zhong-Yuan Zhang , Kai-Di Sun , Si-Qi Wang

Understanding the intrinsic mechanisms of social platforms is an urgent demand to maintain social stability. The rise of large language models provides significant potential for social network simulations to capture attitude dynamics and…

Physics and Society · Physics 2025-12-16 Yanhui Sun , Wu Liu , Wentao Wang , Hantao Yao , Jiebo Luo , Yongdong Zhang

Communication networks have evolved from specialized, research and tactical transmission systems to large-scale and highly complex interconnections of intelligent devices, increasingly becoming more commercial, consumer-oriented, and…

Networking and Internet Architecture · Computer Science 2013-10-01 Gonzalo Mateos , Ketan Rajawat

Dynamic community detection has been prospered as a powerful tool for quantifying changes in dynamic brain network connectivity patterns by identifying strongly connected sets of nodes. However, as the network science problems and network…

Social and Information Networks · Computer Science 2022-07-11 Changwei Gong , Changhong Jing , Yanyan Shen , Shuqiang Wang

Networks (or graphs) are used to model the dyadic relations between entities in a complex system. In cases where there exists multiple relations between the entities, the complex system can be represented as a multilayer network, where the…

Social and Information Networks · Computer Science 2019-10-04 Abhishek Santra , Sanjukta Bhowmick , Sharma Chakravarthy

A community within a network is a group of vertices densely connected to each other but less connected to the vertices outside. The problem of detecting communities in large networks plays a key role in a wide range of research areas, e.g.…

Social and Information Networks · Computer Science 2013-03-08 Pasquale De Meo , Emilio Ferrara , Giacomo Fiumara , Alessandro Provetti

We introduce cyclinbayes, an open-source R package for discovering linear causal relationships with both acyclic and cyclic structures. The package employs scalable Bayesian approaches with spike-and-slab priors to learn directed acyclic…

Computation · Statistics 2026-02-25 Robert Lee , Raymond K. W. Wong , Yang Ni

Community detection refers to finding densely connected groups of nodes in graphs. In important applications, such as cluster analysis and network modelling, the graph is sparse but outliers and heavy-tailed noise may obscure its structure.…

Signal Processing · Electrical Eng. & Systems 2020-11-19 Aylin Tastan , Michael Muma , Abdelhak M. Zoubir

Many complex networks display a mesoscopic structure with groups of nodes sharing many links with the other nodes in their group and comparatively few with nodes of different groups. This feature is known as community structure and encodes…

Physics and Society · Physics 2009-07-31 Andrea Lancichinetti , Santo Fortunato

In the big data era, the relationship between entries becomes more and more complex. Many graph (or network) algorithms have already paid attention to dynamic networks, which are more suitable than static ones for fitting the complex…

Machine Learning · Computer Science 2022-11-17 Dongqi Fu , Jingrui He

The dynamic mode decomposition (DMD) is a simple and powerful data-driven modeling technique that is capable of revealing coherent spatiotemporal patterns from data. The method's linear algebra-based formulation additionally allows for a…

In this paper, we propose a method that extends the persistence-based topological data analysis (TDA) that is typically used for characterizing shapes to general networks. We introduce the concept of the community tree, a tree structure…

Social and Information Networks · Computer Science 2022-04-08 Wei Guo , Ruqian Chen , Yen-Chi Chen , Ashis G. Banerjee

We introduce NetworKit, an open-source software package for analyzing the structure of large complex networks. Appropriate algorithmic solutions are required to handle increasingly common large graph data sets containing up to billions of…

Social and Information Networks · Computer Science 2015-11-16 Christian L. Staudt , Aleksejs Sazonovs , Henning Meyerhenke

Personalized community detection aims to generate communities associated with user need on graphs, which benefits many downstream tasks such as node recommendation and link prediction for users, etc. It is of great importance but lack of…

Information Retrieval · Computer Science 2020-09-08 Zheng Gao , Chun Guo , Xiaozhong Liu

DynamicGEM is an open-source Python library for learning node representations of dynamic graphs. It consists of state-of-the-art algorithms for defining embeddings of nodes whose connections evolve over time. The library also contains the…

Machine Learning · Computer Science 2018-11-28 Palash Goyal , Sujit Rokka Chhetri , Ninareh Mehrabi , Emilio Ferrara , Arquimedes Canedo

In this paper we describe the main featuress of the Bergm package for the open-source R software which provides a comprehensive framework for Bayesian analysis for exponential random graph models: tools for parameter estimation, model…

Computation · Statistics 2014-01-29 Alberto Caimo , Nial Friel