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Purpose: Accurate segmentation of lung and infection in COVID-19 CT scans plays an important role in the quantitative management of patients. Most of the existing studies are based on large and private annotated datasets that are…

Image and Video Processing · Electrical Eng. & Systems 2021-06-09 Jun Ma , Yixin Wang , Xingle An , Cheng Ge , Ziqi Yu , Jianan Chen , Qiongjie Zhu , Guoqiang Dong , Jian He , Zhiqiang He , Yuntao Zhu , Ziwei Nie , Xiaoping Yang

Medical image segmentation annotation suffers from inter-rater variability (IRV) due to differences in annotators' expertise and the inherent blurriness of medical images. Standard approaches that simply average expert labels are flawed, as…

Computer Vision and Pattern Recognition · Computer Science 2025-10-14 Chen Zhong , Yuxuan Yang , Xinyue Zhang , Ruohan Ma , Yong Guo , Gang Li , Jupeng Li

Computer-assisted surgery research requires large, deeply annotated video datasets that capture clinical and technical variability. Existing cataract surgery resources lack the diversity and annotation depth required to train generalizable…

We consider the problem of explaining the decisions of deep neural networks for image recognition in terms of human-recognizable visual concepts. In particular, given a test set of images, we aim to explain each classification in terms of a…

Machine Learning · Computer Science 2018-12-21 Mandana Hamidi-Haines , Zhongang Qi , Alan Fern , Fuxin Li , Prasad Tadepalli

Machine learning models have utilized semantic features, deep features, or both to assess lung nodule malignancy. However, their reliance on manual annotation during inference, limited interpretability, and sensitivity to imaging variations…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Luoting Zhuang , Seyed Mohammad Hossein Tabatabaei , Ramin Salehi-Rad , Linh M. Tran , Denise R. Aberle , Ashley E. Prosper , William Hsu

BACKGROUND: Radiology reports are typically written in a free-text format, making clinical information difficult to extract and use. Recently the adoption of structured reporting (SR) has been recommended by various medical societies thanks…

Traditional image annotation tasks rely heavily on human effort for object selection and label assignment, making the process time-consuming and prone to decreased efficiency as annotators experience fatigue after extensive work. This paper…

Computer Vision and Pattern Recognition · Computer Science 2025-03-17 He Zhang , Xinyi Fu , John M. Carroll

We present MedCATTrainer an interface for building, improving and customising a given Named Entity Recognition and Linking (NER+L) model for biomedical domain text. NER+L is often used as a first step in deriving value from clinical text.…

Human-Computer Interaction · Computer Science 2023-02-28 Thomas Searle , Zeljko Kraljevic , Rebecca Bendayan , Daniel Bean , Richard Dobson

To characterize lobar and segmental airway volume differences between systemic lupus erythematosus (SLE) patients with interstitial lung disease (ILD) and those without ILD (non-ILD) using a deep learning-based approach on non-contrast…

Image and Video Processing · Electrical Eng. & Systems 2026-03-19 Sirong Piao , Ying Ming , Ruijie Zhao , Jiaru Wang , Ran Xiao , Rui Zhao , Zicheng Liao , Qiqi Xu , Shaoze Luo , Bing Li , Lin Li , Zhuangfei Ma , Fuling Zheng , Wei Song

Computer-aided diagnosis system for diffuse lung diseases (DLDs) is necessary for the objective assessment of the lung diseases. In this paper, we develop semantic segmentation model for 5 kinds of DLDs. DLDs considered in this work are…

Image and Video Processing · Electrical Eng. & Systems 2020-03-27 Yuki Suzuki , Kazuki Yamagata , Yanagawa Masahiro , Shoji Kido , Noriyuki Tomiyama

The mainstream CNN-based remote sensing (RS) image semantic segmentation approaches typically rely on massive labeled training data. Such a paradigm struggles with the problem of RS multi-view scene segmentation with limited labeled views…

Computer Vision and Pattern Recognition · Computer Science 2023-08-09 Zipeng Qi , Hao Chen , Chenyang Liu , Zhenwei Shi , Zhengxia Zou

Interactive segmentation is a promising strategy for building robust, generalisable algorithms for volumetric medical image segmentation. However, inconsistent and clinically unrealistic evaluation hinders fair comparison and misrepresents…

Computer Vision and Pattern Recognition · Computer Science 2025-10-13 Parhom Esmaeili , Virginia Fernandez , Pedro Borges , Eli Gibson , Sebastien Ourselin , M. Jorge Cardoso

Spannotation is an open source user-friendly tool developed for image annotation for semantic segmentation specifically in autonomous navigation tasks. This study provides an evaluation of Spannotation, demonstrating its effectiveness in…

Computer Vision and Pattern Recognition · Computer Science 2024-02-29 Samuel O. Folorunsho , William R. Norris

Motivated by the challenging segmentation task of pancreatic tubular networks, this paper tackles two commonly encountered problems in biomedical imaging: Topological consistency of the segmentation, and expensive or difficult annotation.…

Computer Vision and Pattern Recognition · Computer Science 2023-06-29 Kasra Arnavaz , Oswin Krause , Kilian Zepf , Jelena M. Krivokapic , Silja Heilmann , Jakob Andreas Bærentzen , Pia Nyeng , Aasa Feragen

The quality of training data is critical to the performance of machine learning applications in domains like transportation, healthcare, and robotics. Accurate image labeling, however, often relies on time-consuming, expert-driven methods…

Human-Computer Interaction · Computer Science 2025-05-28 Baichuan Li , Larry Powell , Tracy Hammond

We present our novel deep multi-task learning method for medical image segmentation. Existing multi-task methods demand ground truth annotations for both the primary and auxiliary tasks. Contrary to it, we propose to generate the…

Image and Video Processing · Electrical Eng. & Systems 2022-04-06 Binod Bhattarai , Ronast Subedi , Rebati Raman Gaire , Eduard Vazquez , Danail Stoyanov

Many deep learning based automated medical image segmentation systems, in reality, face difficulties in deployment due to the cost of massive data annotation and high latency in model iteration. We propose a dynamic interactive learning…

Computer Vision and Pattern Recognition · Computer Science 2023-12-12 Mu Tian , Xiaohui Chen , Yi Gao

Semantic segmentation neural networks require pixel-level annotations in large quantities to achieve a good performance. In the medical domain, such annotations are expensive, because they are time-consuming and require expert knowledge.…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Grzegorz Chlebus , Andrea Schenk , Horst K. Hahn , Bram van Ginneken , Hans Meine

Artificial intelligence (AI) techniques for image-based segmentation have garnered much attention in recent years. Convolutional neural networks (CNNs) have shown impressive results and potential towards fully automated segmentation in…

Medical Physics · Physics 2021-11-17 Fereshteh Yousefirizi , Abhinav K. Jha , Julia Brosch-Lenz , Babak Saboury , Arman Rahmim

To efficiently establish training databases for machine learning methods, collaborative and crowdsourcing platforms have been investigated to collectively tackle the annotation effort. However, when this concept is ported to the medical…

Computer Vision and Pattern Recognition · Computer Science 2017-08-22 Martin Rajchl , Lisa M. Koch , Christian Ledig , Jonathan Passerat-Palmbach , Kazunari Misawa , Kensaku Mori , Daniel Rueckert