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Carpets of actively bending cilia represent arrays of biological oscillators that can exhibit self-organized metachronal synchronization in the form of traveling waves of cilia phase. This metachronal coordination supposedly enhances fluid…

Biological Physics · Physics 2022-01-11 Anton Solovev , Benjamin M. Friedrich

Many microorganisms propel through complex media by deformations of their flagella. The beat is thought to emerge from interactions between forces of the surrounding fluid, passive elastic response from deformations of the flagellum, and…

Fluid Dynamics · Physics 2024-01-23 Kathryn G. Link , Robert D. Guy , Becca Thomases , Paulo E. Arratia

Sperm traverse their microenvironment through viscous fluid by propagating flagellar waves; the waveform emerges as a consequence of elastic structure, internal active moments, and low Reynolds number fluid dynamics. Engineered…

Fluid Dynamics · Physics 2015-02-19 Thomas Montenegro-Johnson , Hermes Gadelha , David J. Smith

We investigate Faraday waves on a viscoelastic liquid. Onset measurements and a nonlinear phase diagram for the selected patterns are presented. By virtue of the elasticity of the material a surface resonance synchronous to the external…

patt-sol · Physics 2009-10-31 C. Wagner , H. W. Mueller , K. Knorr

A density oscillator is a fluid system in which oscillatory flow occurs between different density fluids through the pore connecting them. We investigate the synchronization in coupled density oscillators using two-dimensional hydrodynamic…

Pattern Formation and Solitons · Physics 2023-03-27 Nana Takeda , Hiroaki Ito , Hiroyuki Kitahata

Over the past decade, autophoretic colloids have emerged as a prototypical system for studying self-propelled motion at microscopic scales, with promising applications in microfluidics, micromachinery, and therapeutics. Their motion in a…

Soft Condensed Matter · Physics 2026-05-19 Ursy Makanga , Akhil Varma , Panayiota Katsamba

Phase synchronization between the vortex shedding behind a two-dimensional circular cylinder and its vibrations is investigated using the phase-reduction analysis. Leveraging this approach enables the development of a one-dimensional,…

Fluid Dynamics · Physics 2021-03-24 M. A. Khodkar , Joseph T. Klamo , Kunihiko Taira

Asymmetries and anisotropies are widespread in biological systems, including in the structure and dynamics of cilia and eukaryotic flagella. These microscopic, hair-like appendages exhibit asymmetric beating patterns that break…

Soft Condensed Matter · Physics 2025-08-22 Bethany Clarke , Yongyun Hwang , Eric E Keaveny

Carpets of beating cilia represent a paradigmatic example of self-organized synchronization of noisy biological oscillators, characterized by traveling waves of cilia phase. We present a multi-scale model of a cilia carpet, which comprises…

Biological Physics · Physics 2022-03-17 Anton Solovev , Benjamin M. Friedrich

The nature of emergent collective behaviors of moving physical agents interacting with their neighborhood is a long-standing open issue in physical and biological systems alike. This calls for studies on the control of synchronization and…

Statistical Mechanics · Physics 2017-08-11 Tirthankar Banerjee , Abhik Basu

According to the acoustic fluidization hypothesis, elastic waves at a characteristic frequency form inside seismic faults even in the absence of an external perturbation. These waves are able to generate a normal stress which contrasts the…

Statistical Mechanics · Physics 2018-02-14 F. Giacco , L. de Arcangelis , M. Pica Ciamarra , E. Lippiello

We use a three-bead-spring model to investigate the dynamics of bi-flagellate micro-swimmers near a surface. While the primary dynamics and scattering are governed by geometric-dependent direct contact, the fluid flows generated by the…

Biological Physics · Physics 2017-08-17 Enkeleida Lushi , Vasily Kantsler , Raymond E. Goldstein

Propelling microorganisms through fluids and moving fluids along cellular surfaces are essential biological functions accomplished by long, thin structures called motile cilia and flagella, whose regular, oscillatory beating breaks the…

The phenomenon of phase synchronization of oscillatory systems arising out of feedback coupling is ubiquitous across physics and biology. In noisy, complex systems, one generally observes transient epochs of synchronization followed by…

Biological Physics · Physics 2019-05-29 Tuhin Chakrabortty , Akash Suman , Anjali Gupta , Varsha Singh , Manoj Varma

Synchronization is of importance in both fundamental and applied physics, but their demonstration at the micro/nanoscale is mainly limited to low-frequency oscillations like mechanical resonators. Here, we report the synchronization of two…

Optics · Physics 2019-07-09 Da Xu , Zi-Zhao Han , Yu-Kun Lu , Qihuang Gong , Cheng-Wei Qiu , Gang Chen , Yun-Feng Xiao

We show that spontaneous density segregation in dense systems of aligning circle swimmers is a condensation phenomenon at odds with the phase separation scenarios usually observed in two-dimensional active matter. The condensates, which…

Soft Condensed Matter · Physics 2024-12-20 Yujia Wang , Bruno Ventéjou , Hugues Chaté , Xia-qing Shi

The spin echo approach is extended to include bio-complexes for which the interaction with dynamical noise is strong. Significant restoration of the free induction decay signal due to homogeneous (decoherence) and inhomogeneous (dephasing)…

Biological Physics · Physics 2015-05-13 Alexander I. Nesterov , Gennady P. Berman

We investigate the synchronization properties of the two-dimensional periodic flow over a circular cylinder using the principles of phase-reduction theory. The influence of harmonic external forcings on the wake dynamics, and the possible…

Fluid Dynamics · Physics 2020-10-28 Mohammad Amin Khodkar , Kunihiko Taira

We study the onset of spontaneous dynamics in the follower force model of an active filament, wherein a slender elastic filament in a viscous liquid is clamped normal to a wall at one end and subjected to a tangential compressive force at…

Fluid Dynamics · Physics 2025-04-02 Ory Schnitzer

We study theoretically and numerically the coupling and rotational hydrodynamic interactions between spherical particles near a planar elastic membrane that exhibits resistance towards shear and bending. Using a combination of the multipole…

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