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Spontaneous synchronisation is a collective phenomenon that can occur in both dynamical classical and quantum systems. Here, we analyse the spontaneous synchronisation dynamics of vibrations assisting energy transfer in a bio-inspired…

Quantum Physics · Physics 2020-09-30 Stefan Siwiak-Jaszek , Thao P. Le , Alexandra Olaya-Castro

The conformations and dynamics of semiflexible filaments subject to a homogeneous external (gravitational) field, e.g., in a centrifuge, are studied numerically and analytically. The competition between hydrodynamic drag and bending…

Biological Physics · Physics 2016-08-23 G. Saggiorato , J. Elgeti , R. G. Winkler , G. Gompper

The unicellular microalga Chlamydomonas reinhardtii (CR) is well known for its bi-flagellated swimming in response to light stimuli. This work aims to study the resynchronization of CR flagella after a high light intensity stimulus, known…

Biological Physics · Physics 2026-02-20 Lucas Federspiel , Jorge Arrieta , Marco Polin , Francoise Argoul , Antoine Allard

Colloidal particles moving in a fluid interact via the induced velocity field. The collective dynamic state for a class of actively forced colloids, driven by harmonic potentials via a rule that couples forces to configurations, to perform…

Soft Condensed Matter · Physics 2011-10-11 Loïc Damet , Giovanni M. Cicuta , Jurij Kotar , Marco Cosentino Lagomarsino , Pietro Cicuta

Cilia and flagella are hair-like extensions of eukaryotic cells which generate oscillatory beat patterns that can propel micro-organisms and create fluid flows near cellular surfaces. The evolutionary highly conserved core of cilia and…

Biological Physics · Physics 2015-05-13 Andreas Hilfinger , Amit K Chattopadhyay , Frank Julicher

Ellipsoidal micron-sized colloidal particles can oscillate spontaneously when trapped in a focused laser beam. If two oscillating particles are held in proximity their oscillations synchronize through hydrodynamic interactions. The degree…

Fluid Dynamics · Physics 2015-03-23 Ivna Kavre , Andrej Vilfan , Dušan Babič

A model of an autonomous three-sphere microswimmer is proposed by implementing a coupling effect between the two natural lengths of an elastic microswimmer. Such a coupling mechanism is motivated by the previous models for synchronization…

Soft Condensed Matter · Physics 2021-05-26 Katsutomo Era , Yuki Koyano , Yuto Hosaka , Kento Yasuda , Hiroyuki Kitahata , Shigeyuki Komura

Oscillatory biochemical signals and mechanical forces must coordinate robustly during development, yet the principles governing their mutual coupling remain poorly understood. In syncytial embryos and cell-free extracts, mitotic waves…

Biological Physics · Physics 2026-01-12 Lara Koehler , Elissavet Sandaltzopoulou , Frank Jülicher , Jan Brugués

Hydrodynamic interactions can generate rich emergent structures in active matter systems. Using large-scale hydrodynamic simulations, we demonstrate that hydrodynamic coupling alone can drive spontaneous self-organization across a hierarchy…

Soft Condensed Matter · Physics 2025-11-17 Zaiyi Shen , Leilei Wang , Shishuang Zhang , Chenlu Li , Kaili Xie , Xu Zheng , Juho S. Lintuvuori

Sperm modulate their flagellar symmetry to navigate through complex physico-chemical environments and achieve reproductive function. Yet it remains elusive how sperm swim forwards despite the inherent asymmetry of several components that…

Biological Physics · Physics 2023-07-21 Xiaomeng Ren , Hermes Bloomfield-Gadêlha

The conformational and dynamical properties of active self-propelled filaments/polymers are investigated in the presence of hydrodynamic interactions by both, Brownian dynamics simulations and analytical theory. Numerically, a discrete…

Soft Condensed Matter · Physics 2020-08-04 Aitor Martin-Gomez , Thomas Eisenstecken , Gerhard Gompper , Roland G. Winkler

Microorganisms develop coordinated beating patterns on surfaces lined with cilia known as metachronal waves. For a chain of cilia attached to a flat ciliate, it has been shown that hydrodynamic interactions alone can lead the system to…

Fluid Dynamics · Physics 2016-03-23 Babak Nasouri , Gwynn J. Elfring

We describe simulations of a microscopic elastic filament immersed in a fluid and subject to a uniform external force. Our method accounts for the hydrodynamic coupling between the flow generated by the filament and the friction force it…

Soft Condensed Matter · Physics 2009-11-11 M. Cosentino Lagomarsino , I. Pagonabarraga , C. P. Lowe

We apply the phase-reduction analysis to examine synchronization properties of periodic fluid flows. The dynamics of unsteady flows are described in terms of the phase dynamics reducing the high-dimensional fluid flow to its single scalar…

Fluid Dynamics · Physics 2018-05-23 Kunihiko Taira , Hiroya Nakao

We investigate the hydrodynamic interaction between two elastic swimmers which are composed of three spheres and two harmonic springs. In this model, the natural length of each spring is assumed to undergo a prescribed cyclic change,…

Soft Condensed Matter · Physics 2019-05-22 Mizuki Kuroda , Kento Yasuda , Shigeyuki Komura

We study synchronization of two cardiomyocytes mediated by elastic interactions through the substrate. Modeling each cell as an oscillating force dipole governed by a Rayleigh-type equation, we derive an effective mechanical coupling from…

Soft Condensed Matter · Physics 2026-05-15 Akinari Tomiie , Nariya Uchida

The hydrodynamics of fish swimming depend on the interaction between the undulation of the body and the flapping of the caudal fin. This study develops a computational framework of a Jackfish-inspired swimmer with an independently mounted…

Fluid Dynamics · Physics 2026-01-23 Dev Pradeepkumar Nayak , Muhammad Saif Ullah Khalid , Ali Tarokh

By taking into account the hydrodynamic interactions in a one dimensional array of model cilia attached to a no-slip cylinderical surface, we investigate their synchronized motion. We show, how does the emergence of metachronal waves depend…

Biological Physics · Physics 2017-05-31 Aref Ghorbani , Ali Najafi

When a millimetric body is placed atop a vibrating liquid bath, the relative motion between the object and interface generates outward propagating waves with an associated momentum flux. Prior work has shown that isolated chiral objects,…

Soft Condensed Matter · Physics 2025-02-28 Jack-William Barotta , Giuseppe Pucci , Eli Silver , Alireza Hooshanginejad , Daniel M. Harris

We introduce a generic model of weakly non-linear self-sustained oscillator as a simplified tool to study synchronisation in a fluid at low Reynolds number. By averaging over the fast degrees of freedom, we examine the effect of…

Soft Condensed Matter · Physics 2015-06-04 M. Leoni , T. B. Liverpool